Data for P4HA1 knockdown in the breast cell line MDA231 (part I) (Study ST001049)

(Analysis AN001864)

Values for each metabolite have been scaled by dividing by the mean across all factors

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MetaboliteF1F2F3F4
a-glycerol-3P_#1-13C0 1.1393 2.4105 0.3483 0.8767
a-glycerol-3P_#1-13C1 1.1331 2.5894 0.2672 0.8715
a-glycerol-3P_#1-13C2 0.9935 1.7547 0.3301 1.2958
a-glycerol-3P_#1-13C3 0.3393 0.6432 0.5469 1.9619
a-glycerol-3P_#1-ALL 1.8249 0.8130 0.6271 1.1078
a-glycerol-3P_#2-13C0 0.8527 2.5681 0.1857 1.1038
a-glycerol-3P_#2-13C1 0.2864 1.7228 0.3937 1.6017
a-glycerol-3P_#2-13C2 0.5133 2.0405 0.3202 1.4029
a-glycerol-3P_#2-13C3 0.1665 0.4215 0.7265 1.9795
a-glycerol-3P_#2-ALL 1.7022 0.4912 0.5842 1.3191
a-ketoglutarate-13C0 0.9758 2.2002 0.2099 1.2021
a-ketoglutarate-13C1 1.4287 0.5616 0.8634 1.1415
a-ketoglutarate-13C2 0.4119 0.8800 0.7967 1.5573
a-ketoglutarate-13C3 0.4358 0.5684 0.7866 1.7113
a-ketoglutarate-13C4 0.1539 0.4665 0.7893 1.9005
a-ketoglutarate-13C5 0.0955 0.2548 0.9794 1.8455
a-ketoglutarate-ALL NA NA NA NA
Ala-13C0 1.1618 2.0928 0.5502 0.8226
Ala-13C1 1.3434 2.0504 0.3882 0.9149
Ala-13C2 0.2723 0.4882 1.2677 1.3521
Ala-13C3 0.2056 0.2449 0.9886 1.7862
Ala-ALL 1.2151 1.8887 0.6109 0.8371
aOHglutarate-13C0 1.0149 1.9864 0.5442 0.9552
aOHglutarate-13C1 0.9854 1.6924 0.5678 1.0933
aOHglutarate-13C2 0.5116 0.9523 0.8070 1.4610
aOHglutarate-13C3 0.2362 0.6849 0.7840 1.7555
aOHglutarate-13C4 0.0375 0.1714 0.7840 2.1115
aOHglutarate-13C5 0.1453 0.2347 0.8253 1.9847
aOHglutarate-ALL NA NA NA NA
Arg-13C0 0.8484 1.8088 0.5268 1.1447
Arg-13C1 0.9927 1.8444 0.7095 0.8720
Arg-13C2 0.7777 1.6822 0.6192 1.1508
Arg-13C3 1.2515 1.4104 1.0077 0.6614
Arg-13C4 2.3246 1.3980 0.3095 0.8293
Arg-13C5 0.4929 1.3316 0.2776 1.8101
Arg-13C6 1.5880 0.9512 0.9319 0.7985
Arg-ALL NA NA NA NA
ascorbate-13C0 1.1409 0.2986 0.6397 1.6405
ascorbate-13C1 1.5205 0.7560 0.6084 1.2534
ascorbate-13C2 0.5623 0.3068 1.1688 1.3966
ascorbate-13C3 2.2581 0.9121 0.3528 1.0621
ascorbate-13C4 0.7131 0.7266 0.7735 1.5066
ascorbate-13C5 1.1438 0.7199 1.1664 0.9017
ascorbate-13C6 1.5671 0.8278 0.7740 1.0285
ascorbate-ALL NA NA NA NA
Asn-13C0 0.9679 1.3553 1.1350 0.7034
Asn-13C1 0.6037 1.2125 1.8622 0.2297
Asn-13C2 0.6753 1.9741 1.0643 0.6110
Asn-13C3 0.2894 1.4870 0.7169 1.3948
Asn-13C4 1.7535 1.5387 0.6951 0.6589
Asn-ALL NA NA NA NA
Asp-13C0 1.0787 2.1781 0.5934 0.7782
Asp-13C1 0.9800 1.9922 0.6140 0.8998
Asp-13C2 0.5528 1.0857 0.8775 1.3032
Asp-13C3 0.2094 0.3288 0.9165 1.8143
Asp-13C4 0.1230 0.2210 0.9071 1.9209
Asp-ALL NA NA NA NA
bOHbutyrate-13C0 0.5354 1.4354 0.8817 1.1330
bOHbutyrate-13C1 1.0272 1.1822 0.7149 1.1804
bOHbutyrate-13C2 1.2504 0.9522 0.9861 0.9126
bOHbutyrate-13C3 1.4658 0.5753 0.9268 1.0527
bOHbutyrate-13C4 1.5243 0.7557 0.9706 0.8894
bOHbutyrate-ALL 0.6383 1.4147 0.8498 1.1237
c-aconitate-13C0 1.2836 3.0166 0.3204 0.5295
c-aconitate-13C1 1.3302 2.3416 0.3981 0.7660
c-aconitate-13C2 0.5271 0.7791 0.6330 1.7140
c-aconitate-13C3 0.3381 0.5220 0.6377 1.9322
c-aconitate-13C4 0.2401 0.2546 0.7028 2.0499
c-aconitate-13C5 0.0806 0.1465 0.5624 2.3241
c-aconitate-13C6 0.0775 0.1949 0.7241 2.1396
c-aconitate-ALL NA NA NA NA
citrate-13C0 1.7779 2.9470 0.1998 0.4377
citrate-13C1 1.3472 3.0678 0.2399 0.5526
citrate-13C2 0.4413 1.0989 0.6469 1.5830
citrate-13C3 0.2684 0.6501 0.7560 1.7847
citrate-13C4 0.0658 0.1961 0.7598 2.1093
citrate-13C5 0.0357 0.0171 0.6022 2.3714
citrate-13C6 0.0110 0.0359 0.6108 2.3658
citrate-ALL NA NA NA NA
Cys-13C0 1.9974 0.1267 1.0761 0.8619
Cys-13C1 1.3647 0.8746 0.6417 1.2387
Cys-13C2 1.1750 1.4115 0.9055 0.8012
Cys-13C3 1.0279 2.6272 0.5246 0.6478
Cys-ALL NA NA NA NA
fumarate-13C0 1.0804 1.6688 0.5982 1.0272
fumarate-13C1 0.9269 1.4832 0.6361 1.1589
fumarate-13C2 0.4106 0.7094 0.8324 1.6077
fumarate-13C3 0.0483 0.1048 0.8409 2.0826
fumarate-13C4 0.0500 0.0473 0.7524 2.1989
fumarate-ALL NA 0.6405 0.8158 1.2719
GAB-13C0 1.0221 1.0357 0.9485 1.0227
GAB-13C1 0.9974 0.9995 0.9723 1.0292
GAB-13C2 1.0990 1.0241 0.9447 0.9937
GAB-13C3 1.1595 1.1408 0.9100 0.9398
GAB-13C4 1.1996 1.0011 1.1083 0.7914
GAB-ALL 1.0221 1.0357 0.9485 1.0227
Gln-13C0 0.8548 1.2478 0.5437 1.4050
Gln-13C1 0.8093 1.2928 0.5398 1.4091
Gln-13C2 0.8667 1.2355 0.5040 1.4448
Gln-13C3 1.1323 1.5559 0.4864 1.1695
Gln-13C4 0.8718 1.1013 0.4673 1.5462
Gln-13C5 0.6694 0.5702 0.6825 1.6977
Gln-ALL 0.8953 2.7945 0.4368 0.4367
Glu-13C0 0.9620 0.9918 1.1236 0.8995
Glu-13C1 0.8582 0.8821 1.2188 0.9111
Glu-13C2 0.8290 0.6413 1.1235 1.1414
Glu-13C3 0.6540 0.7141 0.6947 1.6212
Glu-13C4 0.2368 0.1034 0.9594 1.8705
Glu-13C5 0.5916 0.5963 0.8748 1.5313
Glu-ALL NA NA NA NA
Gly-13C0 1.0975 0.0060 1.2490 1.1993
Gly-13C1 0.9011 1.2632 1.0086 0.9093
Gly-13C2 0.7275 1.2717 1.0846 0.9158
Gly-ALL 1.6039 0.0007 1.3675 0.8302
His-13C0 0.0875 2.1780 0.2187 1.6485
His-13C1 0.0366 2.2581 0.8239 1.0287
His-13C2 0.7673 0.6371 0.3816 1.9162
His-13C3 NA 0.9838 1.0081 NA
His-13C4 1.7456 1.9084 0.5371 0.2717
His-13C5 1.8824 0.6545 0.5307 1.2008
His-13C6 0.8385 0.9212 0.9500 1.1702
His-ALL NA NA NA NA
Ile-13C0 1.1109 1.2698 0.7266 1.0830
Ile-13C1 0.9789 1.2484 0.8113 1.0751
Ile-13C2 1.2207 1.2139 0.7110 1.0717
Ile-13C3 1.0879 0.4810 1.1716 1.0439
Ile-13C4 1.1278 0.6799 1.4823 0.6139
Ile-13C5 1.1070 0.4366 0.7697 1.4585
Ile-13C6 1.0530 1.6280 1.1718 0.4877
Ile-ALL 1.1106 1.2695 0.7272 1.0827
Isocitrate-13C0 1.4660 2.9554 0.2956 0.4937
Isocitrate-13C1 1.3959 2.8507 0.3547 0.5221
Isocitrate-13C2 0.4055 0.8788 0.8553 1.5026
Isocitrate-13C3 0.3039 0.5017 0.8639 1.7333
Isocitrate-13C4 0.0594 0.1917 0.8208 2.0536
Isocitrate-13C5 0.0575 0.0506 0.8240 2.1219
Isocitrate-13C6 0.0165 0.1210 0.6780 2.2532
Isocitrate-ALL NA 2.2936 NA 0.3532
Itaconate-13C0 4.0916 0.1457 0.7954 0.0860
Itaconate-13C1 2.8391 0.1306 0.8221 0.6931
Itaconate-13C2 3.2868 0.3726 0.9213 0.2490
Itaconate-13C3 1.4656 NA 1.6528 0.1144
Itaconate-13C4 1.5185 0.3488 1.6852 0.3812
Itaconate-ALL 1.5860 0.4140 NA NA
Kynurenic_acid-13C0 0.1483 0.0904 2.2603 0.6203
Kynurenic_acid-13C1 0.2058 0.2718 1.9769 0.7843
Kynurenic_acid-13C10 1.3503 2.0890 0.6089 0.6714
Kynurenic_acid-13C2 0.4870 0.3795 1.6212 0.9455
Kynurenic_acid-13C3 0.9493 0.6170 1.6613 0.5555
Kynurenic_acid-13C4 1.3479 0.9491 1.5375 0.3139
Kynurenic_acid-13C5 NA 0.8913 0.9078 1.1466
Kynurenic_acid-13C6 1.4377 1.4858 0.2926 1.2456
Kynurenic_acid-13C7 0.2437 0.7965 0.6612 1.8187
Kynurenic_acid-13C8 0.7664 0.9742 1.1678 0.9619
Kynurenic_acid-13C9 0.9385 1.6277 0.4722 1.4895
Kynurenic_acid-ALL NA NA 1.5728 0.4272
Kynurenine-13C0 0.3836 0.2549 1.2578 1.4230
Kynurenine-13C1 0.3282 2.3409 1.2305 0.5502
Kynurenine-13C10 NA 0.4828 1.4915 0.5342
Kynurenine-13C2 1.1530 0.6478 1.8719 0.3273
Kynurenine-13C3 0.8311 1.3053 1.7003 0.5816
Kynurenine-13C4 0.8760 0.2766 1.0268 1.7938
Kynurenine-13C5 NA 0.4360 1.5673 0.7147
Kynurenine-13C6 0.8947 1.0571 0.3545 1.6696
Kynurenine-13C7 0.4858 NA 1.1284 1.2573
Kynurenine-13C8 NA 0.9744 0.5459 1.4669
Kynurenine-13C9 0.7403 0.9780 1.2475 1.0171
Kynurenine-ALL NA NA NA NA
lactate-13C0 2.0067 2.4440 0.3441 0.4305
lactate-13C1 1.8783 2.2416 0.4121 0.5280
lactate-13C2 1.3550 1.4500 0.6111 0.9864
lactate-13C3 0.1078 0.0979 1.1821 1.7151
lactate-ALL 2.0038 2.4405 0.3466 0.4312
Leu-13C0 1.1631 1.2819 0.7616 1.0159
Leu-13C1 1.1540 1.3076 0.7980 0.9712
Leu-13C2 1.1994 1.3643 0.7972 0.9209
Leu-13C3 0.7314 1.1297 1.1518 0.9177
Leu-13C4 1.8692 0.3506 1.1979 0.6922
Leu-13C5 1.3858 0.2684 1.2895 0.8835
Leu-13C6 1.3085 0.8909 1.2792 0.6211
Leu-ALL 1.1486 1.2963 0.7613 1.0162
Lys-13C0 1.2551 0.1020 1.0104 1.3111
Lys-13C1 3.0052 NA 0.3434 0.6541
Lys-13C2 1.4631 1.4235 0.6913 0.7110
Lys-13C3 0.7740 0.5336 0.8494 1.4968
Lys-13C4 1.3399 0.4371 1.5706 0.5409
Lys-13C5 0.1843 0.3047 0.8368 2.8374
Lys-13C6 1.0647 0.4143 1.0966 1.1639
Lys-ALL NA NA NA NA
Malate-13C0 1.1310 1.9481 0.5556 0.9049
Malate-13C1 1.0337 1.7570 0.6107 0.9940
Malate-13C2 0.6192 0.8874 0.8007 1.4459
Malate-13C3 0.1723 0.2668 0.8431 1.9374
Malate-13C4 0.0784 0.1823 0.7987 2.0709
Malate-ALL NA NA NA NA
Met-13C0 0.3192 1.8222 0.5204 1.4089
Met-13C1 0.9445 1.5347 0.5039 1.2566
Met-13C2 0.8585 0.3900 1.4725 0.9033
Met-13C3 0.2901 NA 1.0715 1.5669
Met-13C4 0.5088 1.3591 0.4299 1.3511
Met-13C5 0.4663 2.0868 0.5918 1.1316
Met-ALL NA NA NA NA
N-Ace-Asp-13C0 0.9598 0.4879 1.2762 NA
N-Ace-Asp-13C1 2.0203 NA 0.9861 0.0075
N-Ace-Asp-13C2 1.4036 0.0429 1.2767 NA
N-Ace-Asp-13C3 1.5186 NA 1.2221 0.0372
N-Ace-Asp-13C4 1.2030 0.5074 1.6978 0.4470
N-Ace-Asp-13C5 1.1890 0.5509 1.7203 0.4098
N-Ace-Asp-13C6 0.7721 0.5722 1.4462 0.7632
N-Ace-Asp-ALL NA NA NA NA
Norleu-ALL 0.9777 1.0322 0.9643 1.0308
OHPro-13C0 1.1781 1.6738 0.6104 0.9636
OHPro-13C1 1.0315 1.3154 0.8577 0.9689
OHPro-13C2 0.8233 1.1587 0.7518 1.2572
OHPro-13C3 1.1739 1.7515 0.6524 0.8850
OHPro-13C4 0.3255 0.3053 1.6812 1.3441
OHPro-13C5 1.0681 0.0335 0.6833 1.7659
OHPro-ALL NA 1.0000 NA NA
Orn-13C0 0.3152 0.1712 0.6288 2.1280
Orn-13C1 0.4607 0.5391 1.2927 1.2074
Orn-13C2 1.5458 1.1351 0.6922 0.9673
Orn-13C3 0.3620 1.5010 1.2459 0.8226
Orn-13C4 0.7237 1.3099 0.6882 1.2951
Orn-13C5 1.3355 1.5555 0.7820 0.7725
Orn-ALL NA NA NA NA
Phe-13C0 1.0126 1.5561 0.6213 1.0943
Phe-13C1 0.4517 1.2932 1.2168 0.9108
Phe-13C2 0.2695 2.0756 0.7544 1.0731
Phe-13C3 0.4658 0.5935 1.4291 1.0412
Phe-13C4 1.6621 1.1155 0.7041 0.9071
Phe-13C5 0.3003 1.8214 0.9514 0.9878
Phe-13C6 0.6392 1.5793 0.2404 1.6503
Phe-13C7 1.4017 NA 0.7125 1.0867
Phe-13C8 0.3785 NA NA 1.3107
Phe-13C9 0.7965 NA 1.0734 1.1301
Phe-ALL NA NA NA NA
PO4-ALL 1.0162 1.0590 0.9291 1.0333
Pro-13C0 1.1322 1.5459 0.6175 1.0434
Pro-13C1 1.1129 1.6158 0.6606 0.9751
Pro-13C2 0.7221 0.8508 0.7888 1.4247
Pro-13C3 0.6584 0.8947 0.5781 1.6454
Pro-13C4 0.6556 0.4830 0.7128 1.7179
Pro-13C5 0.0797 0.2010 0.7198 2.1399
Pro-ALL 1.1442 1.6979 0.5757 1.0033
pyroGlu-13C0 1.1359 2.0639 0.5196 0.8805
pyroGlu-13C1 1.0696 1.7552 0.5999 0.9877
pyroGlu-13C2 0.7201 0.3522 0.8638 1.6001
pyroGlu-13C3 0.8416 0.9948 1.1006 0.9812
pyroGlu-13C4 0.5691 0.6492 1.2731 1.1178
pyroGlu-13C5 0.2117 0.1616 0.8853 1.9281
pyroGlu-ALL 1.5198 0.0487 1.9642 0.4674
SeMet_0-ALL NA NA NA NA
Ser-13C0 0.8581 2.3438 0.4988 0.9003
Ser-13C1 0.9382 2.3401 0.5143 0.8466
Ser-13C2 3.4803 1.0185 0.2374 0.5132
Ser-13C3 1.1099 1.1150 1.2081 0.6794
Ser-ALL 1.0654 2.0125 0.6642 0.7968
Succinate-13C0 0.7674 1.1380 0.6728 1.3745
Succinate-13C1 0.7631 0.7789 0.8097 1.4193
Succinate-13C2 0.3363 0.6005 0.7868 1.7448
Succinate-13C3 0.0927 0.9276 0.8163 1.6735
Succinate-13C4 0.3397 0.3766 1.2618 1.3800
Succinate-ALL 0.0672 1.7924 0.0769 1.9933
Thr-13C0 1.2714 1.3752 0.8857 0.7910
Thr-13C1 1.2357 1.5940 0.6439 0.9412
Thr-13C2 1.4407 0.8059 0.8364 1.0403
Thr-13C3 0.7686 0.7911 0.9689 1.2512
Thr-13C4 1.0570 2.5356 0.6927 0.5110
Thr-ALL 1.2714 1.3752 0.8857 0.7910
Trp-13C0 1.1578 0.7181 0.8129 1.2491
Trp-13C1 0.4545 1.5757 1.2525 0.7324
Trp-13C10 0.9137 0.4003 0.9679 1.3751
Trp-13C11 0.8915 2.2175 0.4459 0.9997
Trp-13C2 1.3147 1.2143 0.6681 1.0674
Trp-13C3 0.8454 0.8730 1.1690 0.9718
Trp-13C4 1.6484 0.8707 1.1221 0.6183
Trp-13C5 0.7573 0.7659 1.1944 1.0440
Trp-13C6 0.7267 0.8022 1.7262 0.5094
Trp-13C7 0.9647 0.6081 1.5349 0.6787
Trp-13C8 1.0660 0.6219 0.9007 1.2554
Trp-13C9 1.4586 1.2076 0.7004 0.9665
Trp-ALL NA NA NA NA
Tyr-13C0 0.5982 1.3687 0.3699 1.6466
Tyr-13C1 0.4427 0.9977 1.3668 0.9130
Tyr-13C2 1.2793 1.7343 0.9987 0.4945
Tyr-13C3 0.7444 1.9077 0.9746 0.6994
Tyr-13C4 0.5594 0.8166 0.8165 1.4955
Tyr-13C5 0.2470 0.0728 1.1235 1.7165
Tyr-13C6 0.5705 0.8705 1.0198 1.2597
Tyr-13C7 1.9548 0.3371 0.7557 1.0984
Tyr-13C8 2.4673 1.1330 0.3542 0.8457
Tyr-13C9 1.0366 0.6110 1.0515 1.1247
Tyr-ALL NA NA NA NA
Val-13C0 1.2217 1.2352 0.7928 0.9788
Val-13C1 1.1575 1.1261 0.8359 1.0222
Val-13C2 1.0349 1.1525 0.7656 1.1407
Val-13C3 1.4888 1.0107 0.9070 0.8432
Val-13C4 2.0586 0.4693 1.0436 0.6924
Val-13C5 0.6048 0.1854 1.0351 1.5698
Val-ALL 1.1486 1.3936 0.7350 0.9939
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Factors:

F1protocol.id:12CGlc_shCTL
F2protocol.id:12CGlc_shP4HA1
F3protocol.id:13CGlc_shCTL
F4protocol.id:13CGlc_shP4HA1
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