RefMet Compound Details

Created with Raphaƫl 2.1.0OHNH2HO
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0135446
RefMet name3-Ketosphinganine
Systematic name3-dehydrosphinganine
SynonymsPubChem Synonyms
Exact mass299.282429 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC18H37NO2View other entries in RefMet with this formula
Molecular descriptors
Molfile30477 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C18H37NO2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(21)17(19)16-20/h17,20H,2-16,19H2,1H3/t17-/m0/s1
InChIKeyKBUNOSOGGAARKZ-KRWDZBQOSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCC(=O)[C@H](CO)N
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassSphingoid bases
Sub ClassSphinganines
Distribution of 3-Ketosphinganine in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting 3-Ketosphinganine
External Links
Pubchem CID439853
LIPID MAPSLMSP01020002
ChEBI ID17862
KEGG IDC02934
HMDB IDHMDB0001480
Chemspider ID388895
MetaCyc IDDEHYDROSPHINGANINE
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving 3-Ketosphinganine

Rxn IDKEGG ReactionEnzyme
R01281 Palmitoyl-CoA + L-Serine <=> 3-Dehydrosphinganine + CoA + CO2Palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating)
R02978 Sphinganine + NADP+ <=> 3-Dehydrosphinganine + NADPH + H+Sphinganine:NADP+ 3-oxidoreductase

Table of KEGG human pathways containing 3-Ketosphinganine

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 2
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