RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0153935
RefMet name19R-Hydroxy-PGF1alpha
Systematic name7-[(1R,2R,3R,5S)-2-[(E,3R,7R)-3,7-dihydroxyoct-1-enyl]-3,5-dihydroxy-cyclopentyl]heptanoic acid
SynonymsPubChem Synonyms
Sum CompositionFA 20:2;O4 View other entries in RefMet with this sum composition
Exact mass372.251190 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC20H36O6View other entries in RefMet with this formula
Molecular descriptors
Molfile2404 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C20H36O6/c1-14(21)7-6-8-15(22)11-12-17-16(18(23)13-19(17)24)9-4-2-3-5-10-20(25)26/h11-12,14-19,21-24H,2-10,13H2,1H3,(H,25
,26)/b12-11+/t14-,15+,16-,17-,18+,19-/m1/s1
InChIKeyJRNZEGAFLBTZDT-AFMCRJLRSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC[C@H](CCC[C@@H](/C=C/[C@@H]1[C@@H](CCCCCCC(=O)O)[C@H](C[C@H]1O)O)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassFatty Acyls
Main ClassEicosanoids
Sub ClassProstaglandins
Distribution of 19R-Hydroxy-PGF1alpha in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting 19R-Hydroxy-PGF1alpha
External Links
Pubchem CID35024006
LIPID MAPSLMFA03010038
ChEBI ID165314
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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