RefMet Compound Details

Created with Raphaƫl 2.1.0OHOHOHOOH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0155763
RefMet name2-Deoxyribonic acid
Alternative nameFA 5:0;2OH[S],3OH[R],5OH
Systematic name(3S,4R)-3,4,5-trihydroxypentanoic acid
SynonymsPubChem Synonyms
Sum CompositionFA 5:0;O3 View other entries in RefMet with this sum composition
Exact mass150.052825 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC5H10O5View other entries in RefMet with this formula
Molecular descriptors
Molfile37220 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C5H10O5/c6-2-4(8)3(7)1-5(9)10/h3-4,6-8H,1-2H2,(H,9,10)/t3-,4+/m0/s1
InChIKeyVBUWJOHKCBQXNU-IUYQGCFVSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC([C@@H]([C@@H](CO)O)O)C(=O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassFatty Acyls
Main ClassFatty acids
Sub ClassHydroxy FA
Distribution of 2-Deoxyribonic acid in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting 2-Deoxyribonic acid
External Links
Pubchem CID11528367
LIPID MAPSLMFA01050477
ChEBI ID86350
HMDB IDHMDB0000366
Chemspider ID9703151
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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