RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0153790
RefMet name20-Hydroxy-PGD2
Systematic name9S,15S,20-trihydroxy-11-oxo-5Z,13E-prostadienoic acid
SynonymsPubChem Synonyms
Sum CompositionFA 20:4;O4 View other entries in RefMet with this sum composition
Exact mass368.219890 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC20H32O6View other entries in RefMet with this formula
Molecular descriptors
Molfile2555 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C20H32O6/c21-13-7-3-4-8-15(22)11-12-17-16(18(23)14-19(17)24)9-5-1-2-6-10-20(25)26/h1,5,11-12,15-18,21-23H,2-4,6-10,13-14H
2,(H,25,26)/b5-1-,12-11+/t15-,16+,17+,18-/m0/s1
InChIKeyNHVNZXCFDPPHDO-UYFMDZAVSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC(=C\C[C@@H]1[C@@H](/C=C/[C@H](CCCCCO)O)C(=O)C[C@@H]1O)\CCCC(=O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassFatty Acyls
Main ClassEicosanoids
Sub ClassProstaglandins
Distribution of 20-Hydroxy-PGD2 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting 20-Hydroxy-PGD2
External Links
Pubchem CID52921881
LIPID MAPSLMFA03010216
ChEBI ID165321
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
  logo