RefMet Compound Details

Created with Raphaƫl 2.1.0NHNOOHOOOPOHNNNH2O
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0159092
RefMet name3',5' cyclic GMP
Systematic name9-[(4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxo-hexahydro-1,3,5,2$l^{5}-furo[3,2-d][1,3,2$l^{5}]dioxaphosphinin-6-yl]-2-amino-6,9-dihydro-1H-purin-6-one
SynonymsPubChem Synonyms
Exact mass345.047438 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC10H12N5O7PView other entries in RefMet with this formula
Molecular descriptors
Molfile37722 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C10H12N5O7P/c11-10-13-7-4(8(17)14-10)12-2-15(7)9-5(16)6-3(21-9)1-20-23(18,19)22-6/h2-3,5-6,9,16H,1H2,(H,18,19)(H3,11,13,1
4,17)/t3-,5-,6-,9-/m1/s1
InChIKeyZOOGRGPOEVQQDX-UUOKFMHZSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC1[C@@H]2[C@H]([C@H]([C@H](n3cnc4c3nc(N)[nH]c4=O)O2)O)OP(=O)(O)O1
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassNucleic acids
Main ClassPurines
Sub ClassPurine rNMP
Distribution of 3',5' cyclic GMP in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting 3',5' cyclic GMP
External Links
Pubchem CID135398570
ChEBI ID16356
KEGG IDC00942
HMDB IDHMDB0001314
Chemspider ID22734
MetaCyc IDCGMP
Spectral data for 3',5' cyclic GMP standards
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving 3',5' cyclic GMP

Rxn IDKEGG ReactionEnzyme
R00434 GTP <=> 3',5'-Cyclic GMP + DiphosphateGTP diphosphate-lyase (cyclizing
R01234 3',5'-Cyclic GMP + H2O <=> GMPGuanosine 3',5'-cyclic phosphate 5'-nucleotidohydrolase

Table of KEGG human pathways containing 3',5' cyclic GMP

Pathway IDHuman Pathway# of reactions
hsa00230 Purine metabolism 2
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