RefMet Compound Details

RefMet IDRM0033927
MW structure37875 (View MW Metabolite Database details)
RefMet name3',5' cyclic dTMP
Systematic name2'-deoxythymidine cyclic 3',5'-(hydrogen phosphate)
SMILESCc1cn([C@H]2C[C@H]3[C@@H](COP(=O)(O)O3)O2)c(=O)[nH]c1=O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass304.046041 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC10H13N2O7PView other entries in RefMet with this formula
InChIInChI=1S/C10H13N2O7P/c1-5-3-12(10(14)11-9(5)13)8-2-6-7(18-8)4-17-20(15,16)19-6/h3,6-8H,2,4H2,1H3,(H,15,16)(H,11,13,14)/t6-,7+,8+/m
0/s1
InChIKeyQSJFDOVQWZVUQG-XLPZGREQSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine rNMP
Pubchem CID12359154
ChEBI ID75183
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving 3',5' cyclic dTMP

Rxn IDKEGG ReactionEnzyme
R01567 ATP + Thymidine <=> ADP + dTMPATP:thymidine 5'-phosphotransferase
R01569 dTMP + H2O <=> Thymidine + Orthophosphatethymidylate 5'-phosphohydrolase
R02092 dTDP + H2O <=> dTMP + OrthophosphatedTDP phosphohydrolase
R02094 ATP + dTMP <=> ADP + dTDPATP:dTMP phosphotransferase
R02101 dUMP + 5,10-Methylenetetrahydrofolate <=> Dihydrofolate + dTMP5,10-Methylenetetrahydrofolate:dUMP C-methyltransferase
R11323 dTTP + H2O <=> dTMP + DiphosphatedTTP diphosphohydrolase

Table of KEGG human pathways containing 3',5' cyclic dTMP

Pathway IDHuman Pathway# of reactions
hsa00240 Pyrimidine metabolism 6
hsa00670 One carbon pool by folate 1
  logo