RefMet Compound Details

Created with Raphaƫl 2.1.0OHOHOHOOHHHHHH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0135823
RefMet name3-Dehydrocholic acid
Systematic name3-oxo-7alpha,12alpha-dihydroxy-5-beta-cholan-24-oic acid
SynonymsPubChem Synonyms
Sum CompositionST 24:2;O5 View other entries in RefMet with this sum composition
Exact mass406.271925 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC24H38O5View other entries in RefMet with this formula
Molecular descriptors
Molfile36431 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C24H38O5/c1-13(4-7-21(28)29)16-5-6-17-22-18(12-20(27)24(16,17)3)23(2)9-8-15(25)10-14(23)11-19(22)26/h13-14,16-20,22,26-27
H,4-12H2,1-3H3,(H,28,29)/t13-,14+,16-,17+,18+,19-,20+,22+,23+,24-/m1/s1
InChIKeyOEKUSRBIIZNLHZ-DJDNIQJZSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@@H]([C@]12C)O)[C@@]1(C)CCC(=O)C[C@H]1C[C@H]3O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSterol Lipids
Main ClassBile acids
Sub ClassC24 Bile acids
Distribution of 3-Dehydrocholic acid in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting 3-Dehydrocholic acid
External Links
Pubchem CID5283956
LIPID MAPSLMST04010443
ChEBI ID88108
HMDB IDHMDB0000502
Spectral data for 3-Dehydrocholic acid standards
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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