RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0153885
RefMet name4-Carboxy-2E-butenoyl-CoA
Alternative nameCoA DC5:1(2E)
Systematic name3'-phosphoadenosine 5'-{3-[(3R)-4-({3-[(2-{[(2E)-4-carboxybut-2-enoyl]sulfanyl}ethyl)amino]-3-oxopropyl}amino)-3-hydroxy-2,2-dimethyl-4-oxobutyl] dihydrogen diphosphate}
SynonymsPubChem Synonyms
Sum CompositionCoA 5:1 View other entries in RefMet with this sum composition
Exact mass879.131264 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC26H40N7O19P3SView other entries in RefMet with this formula
Molecular descriptors
Molfile50112 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C26H40N7O19P3S/c1-26(2,21(39)24(40)29-7-6-15(34)28-8-9-56-17(37)5-3-4-16(35)36)11-49-55(46,47)52-54(44,45)48-10-14-20(51-
53(41,42)43)19(38)25(50-14)33-13-32-18-22(27)30-12-31-23(18)33/h3,5,12-14,19-21,25,38-39H,4,6-11H2,1-2H3,(H,28,34)(H,29,40)(H,35,3
6)(H,44,45)(H,46,47)(H2,27,30,31)(H2,41,42,43)/b5-3+/t14-,19-,20-,21+,25-/m1/s1
InChIKeyURTLOTISFJPPOU-DEGQQWIJSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCC(C)(COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@H](n2cnc3c(N)ncnc23)O1)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCSC(=O)/C=C/CC(=O)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassFatty Acyls
Main ClassFatty esters
Sub ClassAcyl CoAs
Distribution of 4-Carboxy-2E-butenoyl-CoA in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting 4-Carboxy-2E-butenoyl-CoA
External Links
Pubchem CID9543050
LIPID MAPSLMFA07050389
ChEBI ID15497
KEGG IDC02411
HMDB IDHMDB0001290
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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