RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0135641
RefMet name5,6alpha-Epoxy-cholesterol
Systematic name5alpha,6alpha-epoxy-5alpha-cholestan-3beta-ol
SynonymsPubChem Synonyms
Sum CompositionST 27:1;O2 View other entries in RefMet with this sum composition
Exact mass402.349780 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC27H46O2View other entries in RefMet with this formula
Molecular descriptors
Molfile34371 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C27H46O2/c1-17(2)7-6-8-18(3)21-9-10-22-20-15-24-27(29-24)16-19(28)11-14-26(27,5)23(20)12-13-25(21,22)4/h17-24,28H,6-16H2,
1-5H3/t18-,19+,20+,21-,22+,23+,24+,25-,26-,27+/m1/s1
InChIKeyPRYIJAGAEJZDBO-ZEQHCUNVSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCC(C)CCC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3C[C@H]4[C@]5(C[C@H](CC[C@]5(C)[C@H]3CC[C@]12C)O)O4
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSterol Lipids
Main ClassSterols
Sub ClassOxysterols
Distribution of 5,6alpha-Epoxy-cholesterol in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting 5,6alpha-Epoxy-cholesterol
External Links
Pubchem CID227037
LIPID MAPSLMST01010011
ChEBI ID49305
KEGG IDC15992
MetaCyc IDCPD-8895
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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