RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet ID	RM0159286
RefMet name	5-F2c-IsoP
Systematic name	5S,9S,11R-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8R,12S]
Synonyms	PubChem Synonyms
Sum Composition	FA 20:3;O3	View other entries in RefMet with this sum composition
Exact mass	354.240626 (neutral)	Calculate m/z: (Choose adduct) [M+H]+ [M+H-H2O]+ [M.]+ [M+2H]2+ [M+3H]3+ [M+4H]4+ [M+K]+ [M+2K]2+ [M+2K-H]+ [M+Na]+ [M+2Na]2+ [M+2Na-H]+ [M+Li]+ [M+2Li]2+ [M+NH4]+ [M.CH3]+ [M+Ag]+ [M+H+CH3OH]+ [M+H+CH3CN]+ [M+H+2CH3CN]+ [M+Na+CH3CN]+ [M.NaFormate+H]+ [M.NH4Formate+H]+ [M.TMSi]+ [M.tBuDMSi]+ [M+H-Hexose]+ [M+H-EtnP]+ [M+H-SerP]+ [M-H]- [M-H-H2O]- [M-CH3]- [M-2H]2- [M-3H]3- [M-4H]4- [M+Cl]- [M+OAc]- [M+Na-2H]- [M+K-2H]- [M.Formate]- [M.NaFormate-H]- [M.NH4Formate-H]- [M.F]- [M-H-Ser]- [M.HF2]- M(neutral)    View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
Formula	C20H34O5	View other entries in RefMet with this formula
Molecular descriptors
Molfile	2847 (Download molfile/View MW Metabolite Database details)
InChI
InChIKey	RZCPXIZGLPAGEV-HIGBTYBHSA-N	View other enantiomers/diastereomers of this metabolite in RefMet
SMILES	CCCCC/C=C\C[C@H]1[C@@H](/C=C/[C@H](CCCC(=O)O)O)[C@H](C[C@H]1O)O Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super Class	Fatty Acyls
Main Class	Eicosanoids
Sub Class	Isoprostanes
Distribution of 5-F2c-IsoP in NMDR studies
Species	Plot Species distribution
Sample source	Plot Sample source(tissue) distribution
Platform	Platform (MS/NMR) used for detection
Chromatography	Chromatography methods used for detection
Studies	NMDR Studies reporting 5-F2c-IsoP
External Links
Pubchem CID	52921939
LIPID MAPS	LMFA03110035
Structural annotation level
Annotation level	3   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Abbrev	# of Studies	Refmet name(exact structures)	Systematic name
FA 20:3;O3	71	PGF2alpha	9S,11R,15S-trihydroxy-5Z,13E-prostadienoic acid
FA 20:3;O3	43	PGE1	9-oxo-11R,15S-dihydroxy-13E-prostaenoic acid
FA 20:3;O3	18	13,14-Dihydro-15-keto-PGF2alpha	9S,11S-dihydroxy-15-oxo-5Z-prostenoic acid
FA 20:3;O3	15	15-F2t-IsoP	9S,11R,15S-trihydroxy-5Z,13E-prostadienoic acid-cyclo[8S,12R]
FA 20:3;O3	12	5-iPF2alpha-VI	5,9S,11R-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8S,12R]
FA 20:3;O3	10	PGD1	9S,15S-dihydroxy-11-oxo-13E-prostaenoic acid
FA 20:3;O3	4	15-Keto-PGF1alpha	9S,11R-dihydroxy-15-oxo-13E-prostaenoic acid
FA 20:3;O3	4	PGF2beta	9R,11R,15S-trihydroxy-5Z,13E-prostadienoic acid
FA 20:3;O3	4	PGH1	9S,11R-epidioxy-15S-hydroxy-13E-prostaenoic acid
FA 20:3;O3	2	13,14-Dihydro-15-keto-PGE1	9,15-dioxo-11R-hydroxy-prostanoic acid
FA 20:3;O3	1	11-beta-PGE1	9-oxo-11S,15S-dihydroxy-13E-prostaenoic acid
FA 20:3;O3	1	11beta-PGF2alpha	9S,11S,15S-trihydroxy-5Z,13E-prostadienoic acid
FA 20:3;O3	1	15-epi-15-F2t-IsoP	9S,11R,15R-trihydroxy-5Z,13E-prostadienoic acid-cyclo[8S,12R]
FA 20:3;O3	1	15R-PGE1	9-oxo-11R,15R-dihydroxy-13E-prostaenoic acid
FA 20:3;O3	1	15R-PGF2alpha	9S,11R,15R-trihydroxy-5Z,13E-prostadienoic acid
FA 20:3;O3	1	6alpha-PGI1	6R,9S-epoxy-11R,15S-dihydroxy-13E-prostaenoic acid
FA 20:3;O3	1	8-iso-13,14-dihydro-15-keto-PGF2alpha	9S,11R-dihydroxy-15-oxo-5Z-prostaenoic acid-cyclo[8S,12R]
FA 20:3;O3	1	ent-8-iso-PGF2alpha	9R,11S,15R-trihydroxy-5Z,13E-prostadienoic acid-cyclo[8R,12S]
FA 20:3;O3	1	Trioxilin A3	8,11R,12S-trihydroxy-5Z,9E,14Z-eicosatrienoic acid
FA 20:3;O3	1	Troxilin B3	10,11S,12R-trihydroxy-5Z,8Z,14Z-eicosatrienoic acid
FA 20:3;O3		11beta-13,14-Dihydro-15-keto-PGF2alpha	9S,11R-dihydroxy-15-oxo-5Z-prostenoic acid
FA 20:3;O3		5-F2c-IsoP	5S,9S,11R-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8R,12S]
FA 20:3;O3		6beta-PGI1	6S,9R-epoxy-11R,15S-dihydroxy-13E-prostaenoic acid
FA 20:3;O3		8-iso-PGE1	9-oxo-11R,15S-dihydroxy-13E-prostaenoic acid-cyclo[8S,12R]
FA 20:3;O3		8-iso-PGF2beta	9R,11R,15S-trihydroxy-5Z,13E-prostadienoic acid-cyclo[8S,12R]
FA 20:3;O3		Ent-PGF2alpha	9R,11S,15R-trihydroxy-5Z,13E-prostadienoic acid-cyclo[8S,12S]