RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0135130
RefMet nameCDP-DG 12:0/12:0
Alternative nameCDP-DG(12:0/12:0)
Systematic name1,2-Didodecanoyl-sn-glycero-3-cytidine-5'-diphosphate
SynonymsPubChem Synonyms
Sum CompositionCDP-DG 24:0 View other entries in RefMet with this sum composition
Exact mass841.389097 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC36H65N3O15P2View other entries in RefMet with this formula
Molecular descriptors
Molfile21222 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C36H65N3O15P2/c1-3-5-7-9-11-13-15-17-19-21-31(40)49-25-28(52-32(41)22-20-18-16-14-12-10-8-6-4-2)26-50-55(45,46)54-56(47,4
8)51-27-29-33(42)34(43)35(53-29)39-24-23-30(37)38-36(39)44/h23-24,28-29,33-35,42-43H,3-22,25-27H2,1-2H3,(H,45,46)(H,47,48)(H2,37,3
8,44)/t28-,29-,33+,34?,35-/m1/s1
InChIKeyPTPPKXVNJJIECF-LSSKPTOFSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@H](n2ccc(N)nc2=O)O1)O)O)OC(=O)CCCCCCCCCCC
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassGlycerophospholipids
Main ClassCDP-Glycerols
Sub ClassCDP-diacylglycerols (CDP-diacylglycerolss)
Distribution of CDP-DG 12:0/12:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting CDP-DG 12:0/12:0
External Links
Pubchem CID3247021
LIPID MAPSLMGP13010001
ChEBI ID34046
KEGG IDC13891
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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