RefMet Compound Details

MW structure37783 (View MW Metabolite Database details)
RefMet nameCDP-choline
Alternative nameCytidine 5'-diphosphocholine
Systematic name{2-[({[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl phosphonato)oxy]ethyl}trimethylazanium
SMILESC[N+](C)(C)CCOP(=O)([O-])OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@H](n2ccc(N)nc2=O)O1)O)O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass488.107337 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC14H26N4O11P2View other entries in RefMet with this formula
InChIInChI=1S/C14H26N4O11P2/c1-18(2,3)6-7-26-30(22,23)29-31(24,25)27-8-9-11(19)12(20)13(28-9)17-5-4-10(15)16-14(17)21/h4-5,9,11-13,19-2
0H,6-8H2,1-3H3,(H3-,15,16,21,22,23,24,25)/t9-,11-,12-,13-/m1/s1
InChIKeyRZZPDXZPRHQOCG-OJAKKHQRSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine rNDP
Pubchem CID13804
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving CDP-choline

Rxn IDKEGG ReactionEnzyme
R01890 CTP + Choline phosphate <=> Diphosphate + CDP-cholineCTP:choline-phosphate cytidylyltransferase

Table of KEGG human pathways containing CDP-choline

Pathway IDHuman Pathway# of reactions
hsa00564 Glycerophospholipid metabolism 2
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