RefMet Compound Details

Created with Raphaƫl 2.1.0NOOHNOOHNH2OHOOOOHOOHOOHPPPO
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0135881
RefMet nameCTP
Systematic nameCytidine-5'- triphosphate
SynonymsPubChem Synonyms
Exact mass482.984521 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC9H16N3O14P3View other entries in RefMet with this formula
Molecular descriptors
Molfile37065 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C9H16N3O14P3/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,
19,20)(H,21,22)(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKeyPCDQPRRSZKQHHS-XVFCMESISA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESc1cn([C@H]2[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O2)O)O)c(=O)nc1N
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine rNTP
Distribution of CTP in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting CTP
External Links
Pubchem CID6176
ChEBI ID17677
KEGG IDC00063
HMDB IDHMDB0000082
Chemspider ID5941
MetaCyc IDCTP
Spectral data for CTP standards
BMRB ID(NMR)View NMR spectra
NP-MRD ID(NMR)View NMR spectra
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving CTP

Rxn IDKEGG ReactionEnzyme
R00515 CTP + H2O <=> CMP + DiphosphateCTP diphosphohydrolase (diphosphate-forming)
R00568 CTP + H2O <=> UTP + AmmoniaCTP aminohydrolase
R00569 CTP + H2O <=> CDP + OrthophosphateCTP phosphohydrolase
R00570 ATP + CDP <=> ADP + CTPATP:CDP phosphotransferase
R00571 ATP + UTP + Ammonia <=> ADP + Orthophosphate + CTPUTP:ammonia ligase (ADP-forming)
R00573 ATP + UTP + L-Glutamine + H2O <=> ADP + Orthophosphate + CTP + L-GlutamateUTP:L-glutamine amido-ligase (ADP-forming)

Table of KEGG human pathways containing CTP

Pathway IDHuman Pathway# of reactions
hsa00240 Pyrimidine metabolism 5
hsa01100 Metabolic pathways 2
hsa01232 Nucleotide metabolism 2
hsa01240 Biosynthesis of cofactors 2
hsa00040 Pentose and glucuronate interconversions 1
hsa00515 Mannose type O-glycan biosynthesis 1
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