RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0136522
RefMet nameChlorhexidine
Systematic nameN-(4-chlorophenyl)-1-3-(6-{N-[3-(4-chlorophenyl)carbamimidamidomethanimidoyl]amino}hexyl)carbamimidamidomethanimidamide
SynonymsPubChem Synonyms
Exact mass504.203196 (neutral)
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View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC22H30Cl2N10View other entries in RefMet with this formula
Molecular descriptors
Molfile43153 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C22H30Cl2N10/c23-15-5-9-17(10-6-15)31-21(27)33-19(25)29-13-3-1-2-4-14-30-20(26)34-22(28)32-18-11-7-16(24)8-12-18/h5-12H,1
-4,13-14H2,(H5,25,27,29,31,33)(H5,26,28,30,32,34)
InChIKeyGHXZTYHSJHQHIJ-UHFFFAOYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC(CCCNC(=N)NC(=N)Nc1ccc(cc1)Cl)CCNC(=N)NC(=N)Nc1ccc(cc1)Cl
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Chemical/Biochemical Classification
Super ClassAlkaloids
Main ClassOrnithine alkaloids
Sub ClassPolyamines
Distribution of Chlorhexidine in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting Chlorhexidine
External Links
Pubchem CID9552079
ChEBI ID3614
KEGG IDC06902
HMDB IDHMDB0015016
Chemspider ID2612
EPA CompToxDTXCID0013314
Spectral data for Chlorhexidine standards
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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