RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet ID	RM0135798
RefMet name	Cholic acid
Systematic name	3Alpha,7Alpha,12Alpha-trihydroxy-5Beta-cholan-24-oic acid
Synonyms	PubChem Synonyms
Sum Composition	ST 24:1;O5	View other entries in RefMet with this sum composition
Exact mass	408.287575 (neutral)	Calculate m/z: (Choose adduct) [M+H]+ [M+H-H2O]+ [M.]+ [M+2H]2+ [M+3H]3+ [M+4H]4+ [M+K]+ [M+2K]2+ [M+2K-H]+ [M+Na]+ [M+2Na]2+ [M+2Na-H]+ [M+Li]+ [M+2Li]2+ [M+NH4]+ [M.CH3]+ [M+Ag]+ [M+H+CH3OH]+ [M+H+CH3CN]+ [M+H+2CH3CN]+ [M+Na+CH3CN]+ [M.NaFormate+H]+ [M.NH4Formate+H]+ [M.TMSi]+ [M.tBuDMSi]+ [M+H-Hexose]+ [M+H-EtnP]+ [M+H-SerP]+ [M-H]- [M-H-H2O]- [M-CH3]- [M-2H]2- [M-3H]3- [M-4H]4- [M+Cl]- [M+OAc]- [M+Na-2H]- [M+K-2H]- [M.Formate]- [M.NaFormate-H]- [M.NH4Formate-H]- [M.F]- [M-H-Ser]- [M.HF2]- M(neutral)    View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
Formula	C24H40O5	View other entries in RefMet with this formula
Molecular descriptors
Molfile	36243 (Download molfile/View MW Metabolite Database details)
InChI	InChI=1S/C24H40O5/c1-13(4-7-21(28)29)16-5-6-17-22-18(12-20(27)24(16,17)3)23(2)9-8-15(25)10-14(23)11-19(22)26/h13-20,22,25-27H,4-12 H2,1-3H3,(H,28,29)/t13-,14+,15-,16-,17+,18+,19-,20+,22+,23+,24-/m1/s1
InChIKey	BHQCQFFYRZLCQQ-OELDTZBJSA-N	View other enantiomers/diastereomers of this metabolite in RefMet
SMILES	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@@H]([C@]12C)O)[C@@]1(C)CC[C@H](C[C@H]1C[C@H]3O)O Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super Class	Sterol Lipids
Main Class	Bile acids
Sub Class	C24 Bile acids
Distribution of Cholic acid in NMDR studies
Species	Plot Species distribution
Sample source	Plot Sample source(tissue) distribution
Platform	Platform (MS/NMR) used for detection
Chromatography	Chromatography methods used for detection
Studies	NMDR Studies reporting Cholic acid
External Links
Pubchem CID	221493
LIPID MAPS	LMST04010001
ChEBI ID	16359
KEGG ID	C00695
HMDB ID	HMDB0000619
Chemspider ID	192176
MetaCyc ID	CHOLATE
EPA CompTox	DTXCID90196825
Spectral data for Cholic acid standards
BMRB ID(NMR)	View NMR spectra
MassBank(EU)	View MS spectra
Structural annotation level
Annotation level	1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Cholic acid

Rxn ID	KEGG Reaction	Enzyme
R02794	ATP + Cholic acid + CoA <=> AMP + Diphosphate + Choloyl-CoA	Cholate:CoA ligase (AMP-forming)
R07296	Choloyl-CoA + H2O <=> Cholic acid + CoA	choloyl-CoA hydrolase

Table of KEGG human pathways containing Cholic acid

Pathway ID	Human Pathway	# of reactions
hsa00120	Primary bile acid biosynthesis	2