RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0050094
RefMet nameCidofovir
Systematic name({[(2S)-1-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3-hydroxypropan-2-yl]oxy}methyl)phosphonic acid
SynonymsPubChem Synonyms
Exact mass279.062025 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC8H14N3O6PView other entries in RefMet with this formula
Molecular descriptors
Molfile42737 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C8H14N3O6P/c9-7-1-2-11(8(13)10-7)3-6(4-12)17-5-18(14,15)16/h1-2,6,12H,3-5H2,(H2,9,10,13)(H2,14,15,16)/t6-/m0/s1
InChIKeyVWFCHDSQECPREK-LURJTMIESA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESc1cn(C[C@@H](CO)OCP(=O)(O)O)c(=O)nc1N
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidones
Distribution of Cidofovir in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Cidofovir
External Links
Pubchem CID60613
ChEBI ID3696
KEGG IDC06909
HMDB IDHMDB0014513
Chemspider ID54636
EPA CompToxDTXCID70196888
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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