RefMet Compound Details

Created with Raphaƫl 2.1.0OHONH2OH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0136220
RefMet nameD-Serine
Systematic name(2R)-2-amino-3-hydroxypropanoic acid
SynonymsPubChem Synonyms
Exact mass105.042594 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC3H7NO3View other entries in RefMet with this formula
Molecular descriptors
Molfile38320 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m1/s1
InChIKeyMTCFGRXMJLQNBG-UWTATZPHSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC([C@H](C(=O)O)N)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassOrganic acids
Main ClassAmino acids and peptides
Sub ClassAmino acids
Distribution of D-Serine in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting D-Serine
External Links
Pubchem CID71077
ChEBI ID16523
KEGG IDC00740
HMDB IDHMDB0003406
Chemspider ID64231
MetaCyc IDD-SERINE
EPA CompToxDTXCID20202802
Spectral data for D-Serine standards
NP-MRD ID(NMR)View NMR spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving D-Serine

Rxn IDKEGG ReactionEnzyme
R00589 L-Serine <=> D-Serineserine racemase

Table of KEGG human pathways containing D-Serine

Pathway IDHuman Pathway# of reactions
hsa00260 Glycine, serine and threonine metabolism 1
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