RefMet Compound Details
RefMet ID, RefMet name, exact mass and formula | ||
RefMet ID | RM0033601 | |
---|---|---|
RefMet name | GMP | |
Systematic name | {[(2R,3S,4R,5R)-5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acid | |
Synonyms | PubChem Synonyms | |
Exact mass | 363.058003 (neutral) | Calculate m/z:
View other RefMet entries with this exact (neutral) mass: +/- 0.05 amu +/- 0.1 amu +/- 0.2 amu +/- 0.5 amu |
Formula | C10H14N5O8P | View other entries in RefMet with this formula |
Molecular descriptors | ||
Molfile | 37773 (Download molfile/View MW Metabolite Database details) | |
InChI | InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3 ,11,13,14,18)/t3-,5-,6-,9-/m1/s1 | |
InChIKey | RQFCJASXJCIDSX-UUOKFMHZSA-N | View other enantiomers/diastereomers of this metabolite in RefMet |
SMILES | C([C@@H]1[C@H]([C@H]([C@H](n2cnc3c2nc(N)[nH]c3=O)O1)O)O)OP(=O)(O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6) | |
Chemical/Biochemical Classification | ||
Super Class | Nucleic acids | |
Main Class | Purines | |
Sub Class | Purine rNMP | |
Distribution of GMP in NMDR studies | ||
Species | Plot Species distribution | |
Sample source | Plot Sample source(tissue) distribution | |
Platform | Platform (MS/NMR) used for detection | |
Chromatography | Chromatography methods used for detection | |
Studies | NMDR Studies reporting GMP | |
External Links | ||
Pubchem CID | 135398631 | |
ChEBI ID | 17345 | |
KEGG ID | C00144 | |
HMDB ID | HMDB0001397 | |
Chemspider ID | 6545 | |
MetaCyc ID | GMP | |
Spectral data for GMP standards | ||
NP-MRD ID(NMR) | View NMR spectra | |
MassBank(EU) | View MS spectra | |
Structural annotation level | ||
Annotation level | 1 (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition) |
Table of KEGG reactions in human pathways involving GMP
Rxn ID | KEGG Reaction | Enzyme |
---|---|---|
R00328 | GDP + H2O <=> GMP + Orthophosphate | GDP phosphohydrolase |
R00332 | ATP + GMP <=> ADP + GDP | ATP:GMP phosphotransferase |
R00426 | GTP + H2O <=> GMP + Diphosphate | GTP diphosphohydrolase (diphosphate-forming) |
R01134 | IMP + Ammonia + NADP+ <=> GMP + NADPH + H+ | inosine-5'-phosphate:NADP+ oxidoreductase (aminating) |
R01227 | GMP + H2O <=> Guanosine + Orthophosphate | guanosine 5'-monophosphate phosphohydrolase |
R01228 | ATP + Guanosine <=> ADP + GMP | ATP:guanosine 5'-phosphotransferase |
R01229 | GMP + Diphosphate <=> Guanine + 5-Phospho-alpha-D-ribose 1-diphosphate | GMP:diphosphate 5-phospho-alpha-D-ribosyltransferase |
R01230 | ATP + Xanthosine 5'-phosphate + Ammonia <=> AMP + Diphosphate + GMP | Xanthosine-5'-phosphate:ammonia ligase (AMP-forming) |
R01231 | ATP + Xanthosine 5'-phosphate + L-Glutamine + H2O <=> AMP + Diphosphate + GMP + L-Glutamate | Xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming) |
R01234 | 3',5'-Cyclic GMP + H2O <=> GMP | Guanosine 3',5'-cyclic phosphate 5'-nucleotidohydrolase |
Table of KEGG human pathways containing GMP
Pathway ID | Human Pathway | # of reactions |
---|---|---|
hsa00230 | Purine metabolism | 9 |
hsa01100 | Metabolic pathways | 3 |
hsa01232 | Nucleotide metabolism | 2 |