RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0136646
RefMet nameGentisin
Systematic name1,7-dihydroxy-3-methoxy-9H-xanthen-9-one
SynonymsPubChem Synonyms
Exact mass258.052823 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC14H10O5View other entries in RefMet with this formula
Molecular descriptors
Molfile45082 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C14H10O5/c1-18-8-5-10(16)13-12(6-8)19-11-3-2-7(15)4-9(11)14(13)17/h2-6,15-16H,1H3
InChIKeyXOXYHGOIRWABTC-UHFFFAOYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCOc1cc(c2c(c1)oc1ccc(cc1c2=O)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassPolyketides
Main ClassAromatic polyketides
Sub ClassXanthones
Distribution of Gentisin in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Gentisin
External Links
Pubchem CID5281636
ChEBI ID5324
KEGG IDC10066
HMDB IDHMDB0031760
Chemspider ID4444955
EPA CompToxDTXCID20118398
PhytoHub DBPHUB001678
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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