RefMet Compound Details

Created with Raphaƫl 2.1.0OOOHOOHOHHH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0138848
RefMet nameGibberellin A3
Systematic name(1R,2R,5S,8S,9S,10R,11R,12S)-5,12-dihydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadec-13-ene-9-carboxylic acid
SynonymsPubChem Synonyms
Exact mass346.141640 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC19H22O6View other entries in RefMet with this formula
Molecular descriptors
Molfile28561 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C19H22O6/c1-9-7-17-8-18(9,24)5-3-10(17)19-6-4-11(20)16(2,15(23)25-19)13(19)12(17)14(21)22/h4,6,10-13,20,24H,1,3,5,7-8H2,2
H3,(H,21,22)/t10-,11+,12-,13-,16-,17+,18+,19-/m1/s1
InChIKeyIXORZMNAPKEEDV-OBDJNFEBSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC=C1C[C@]23C[C@]1(CC[C@H]2[C@]12C=C[C@@H]([C@](C)([C@H]1[C@@H]3C(=O)O)C(=O)O2)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassPrenol Lipids
Main ClassIsoprenoids
Sub ClassC20 isoprenoids
Distribution of Gibberellin A3 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Gibberellin A3
External Links
Pubchem CID439551
LIPID MAPSLMPR0104170002
ChEBI ID28833
KEGG IDC01699
HMDB IDHMDB0003559
EPA CompToxDTXCID50196841
Spectral data for Gibberellin A3 standards
NP-MRD ID(NMR)View NMR spectra
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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