RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0137273
RefMet nameHodgkinsine
Systematic name(3aR,8bR)-5-[(3aR,8bR)-3-methyl-1,2,3a,4-tetrahydropyrrolo[2,3-b]indol-8b-yl]-8b-[(3aS,8bS)-3-methyl-1,2,3a,4-tetrahydropyrrolo[2,3-b]indol-8b-yl]-3-methyl-1,2,3a,4-tetrahydropyrrolo[2,3-b]indole
SynonymsPubChem Synonyms
Exact mass518.315795 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC33H38N6View other entries in RefMet with this formula
Molecular descriptors
Molfile69133 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C33H38N6/c1-37-18-15-31(21-9-4-6-13-25(21)34-28(31)37)23-11-8-12-24-27(23)36-30-33(24,17-20-39(30)3)32-16-19-38(2)29(32)3
5-26-14-7-5-10-22(26)32/h4-14,28-30,34-36H,15-20H2,1-3H3/t28?,29-,30?,31+,32+,33-/m0/s1
InChIKeyDPVWJPVYOXKFRQ-SFUHVFQBSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCN1CC[C@@]2(c3ccccc3NC12)c1cccc2c1NC1[C@@]2(CCN1C)[C@]12CCN(C)[C@@H]2Nc2ccccc12
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassAlkaloids
Main ClassTryptophan alkaloids
Sub ClassPyrroloindole alkaloids
Distribution of Hodgkinsine in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Hodgkinsine
External Links
Pubchem CID118701325
ChEBI ID5741
KEGG IDC09211
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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