RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0139104
RefMet nameJoro spider toxin
Systematic name(2S)-N-[5-[3-[4-(3-aminopropylamino)butylamino]propanoylamino]pentyl]-2-[[2-(2,4-dihydroxyphenyl)acetyl]amino]butanediamide
SynonymsPubChem Synonyms
Exact mass565.358782 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC27H47N7O6View other entries in RefMet with this formula
Molecular descriptors
Molfile68127 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C27H47N7O6/c28-10-6-13-30-11-4-5-12-31-16-9-25(38)32-14-2-1-3-15-33-27(40)22(19-24(29)37)34-26(39)17-20-7-8-21(35)18-23(2
0)36/h7-8,18,22,30-31,35-36H,1-6,9-17,19,28H2,(H2,29,37)(H,32,38)(H,33,40)(H,34,39)/t22-/m0/s1
InChIKeySJLRBGDPTALRDM-QFIPXVFZSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC(CCNC(=O)CCNCCCCNCCCN)CCNC(=O)[C@H](CC(=O)N)NC(=O)Cc1ccc(cc1O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassOrganic acids
Main ClassAmino acids and peptides
Sub ClassAmino acids
Distribution of Joro spider toxin in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Joro spider toxin
External Links
Pubchem CID119582
ChEBI ID34802
KEGG IDC13931
Spectral data for Joro spider toxin standards
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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