RefMet Compound Details

Created with Raphaƫl 2.1.0OHOOHOO
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0152651
RefMet nameLGD2
Systematic name(8R,12R)-9,10-seco-9,11-dioxo-15S-hydroxy-5Z,13E-prostadienoic acid
SynonymsPubChem Synonyms
Sum CompositionFA 20:4;O3 View other entries in RefMet with this sum composition
Exact mass352.224975 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC20H32O5View other entries in RefMet with this formula
Molecular descriptors
Molfile2781 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C20H32O5/c1-3-4-7-11-18(23)13-14-19(16(2)22)17(15-21)10-8-5-6-9-12-20(24)25/h5,8,13-15,17-19,23H,3-4,6-7,9-12H2,1-2H3,(H,
24,25)/b8-5-,14-13+/t17-,18-,19-/m0/s1
InChIKeyMLLWPVVMXGUOHD-QNUMDXCLSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCC[C@@H](/C=C/[C@@H](C(=O)C)[C@@H](C/C=C\CCCC(=O)O)C=O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassFatty Acyls
Main ClassEicosanoids
Sub ClassLevuglandins
Distribution of LGD2 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting LGD2
External Links
Pubchem CID9548876
LIPID MAPSLMFA03100002
ChEBI ID34820
KEGG IDC13808
HMDB IDHMDB0002400
Chemspider ID7827799
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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