RefMet Compound Details

Created with Raphaƫl 2.1.0HNHOOHHOOOHOHOOHOOHOHOHOH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0135613
RefMet nameLacCer 18:1;O2/24:0
Alternative nameLacCer(d18:1/24:0)
Systematic nameN-(tetracosanoyl)-1-b-lactosyl-sphing-4-enine
SynonymsPubChem Synonyms
Sum CompositionLacCer 42:1;O2 View other entries in RefMet with this sum composition
Exact mass973.742944 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC54H103NO13View other entries in RefMet with this formula
Molecular descriptors
Molfile31140 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C54H103NO13/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-26-28-30-32-34-36-38-46(59)55-42(43(58)37-35-33-31-29-27-25-16-14
-12-10-8-6-4-2)41-65-53-51(64)49(62)52(45(40-57)67-53)68-54-50(63)48(61)47(60)44(39-56)66-54/h35,37,42-45,47-54,56-58,60-64H,3-34,
36,38-41H2,1-2H3,(H,55,59)/b37-35+/t42-,43+,44?,45?,47-,48-,49+,50?,51?,52+,53+,54-/m0/s1
InChIKeyKDEYEEYMIPNKIJ-OGIIFMLESA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@H]1[C@@H]([C@H]([C@@H]([C@@H](CO)O1)O[C@H]1[C@@H]([C@H]([C@H]([C@@H](CO)O1)O)O)O)O)O)[C@@H](/C=C/CCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHex2Cer (Dihexosyl ceramides)
Distribution of LacCer 18:1;O2/24:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting LacCer 18:1;O2/24:0
External Links
Pubchem CID44260144
LIPID MAPSLMSP0501AB07
ChEBI ID84764
KEGG IDC01290
HMDB IDHMDB0011595
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving LacCer 18:1;O2/24:0

Rxn IDKEGG ReactionEnzyme
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase
R05937 CMP-N-acetylneuraminate + Lactosylceramide <=> CMP + GM3CMP-N-acetylneuraminate + Lactosylceramide <=> CMP + GM3
R05938 UDP-N-acetyl-D-galactosamine + Lactosylceramide <=> UDP + GA2UDP-N-acetyl-D-galactosamine + Lactosylceramide <=> UDP + GA2
R05971 UDP-N-acetyl-D-glucosamine + Lactosylceramide <=> UDP + Lc3CerUDP-N-acetyl-D-glucosamine + Lactosylceramide <=> UDP + Lc3Cer
R12960 3'-Phosphoadenylyl sulfate + Lactosylceramide <=> Adenosine 3',5'-bisphosphate + Lactosylceramide sulfate3'-phosphoadenylyl-sulfate:lactosylceramide 3'-sulfotransferase
R12961 Lactosylceramide sulfate + H2O <=> Lactosylceramide + Sulfatelactosylceramide-sulfate sulfohydrolase

Table of KEGG human pathways containing LacCer 18:1;O2/24:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
hsa00604 Glycosphingolipid biosynthesis - ganglio series 2
hsa01100 Metabolic pathways 2
hsa00601 Glycosphingolipid biosynthesis - lacto and neolacto series 1
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