RefMet Compound Details

Created with Raphaƫl 2.1.0OHOOHO
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0153291
RefMet nameMalonic acid
Systematic namePropanedioic acid
SynonymsPubChem Synonyms
Sum CompositionFA 3:1;O2 View other entries in RefMet with this sum composition
Exact mass104.010960 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC3H4O4View other entries in RefMet with this formula
Molecular descriptors
Molfile1964 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C3H4O4/c4-2(5)1-3(6)7/h1H2,(H,4,5)(H,6,7)
InChIKeyOFOBLEOULBTSOW-UHFFFAOYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC(C(=O)O)C(=O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassFatty Acyls
Main ClassFatty acids
Sub ClassDicarboxylic acids
Distribution of Malonic acid in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Malonic acid
External Links
Pubchem CID867
LIPID MAPSLMFA01170041
ChEBI ID30794
KEGG IDC00383
HMDB IDHMDB0000691
Chemspider ID844
Spectral data for Malonic acid standards
NP-MRD ID(NMR)View NMR spectra
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Malonic acid

Rxn IDKEGG ReactionEnzyme
R12300 ATP + Malonate + CoA <=> AMP + Diphosphate + Malonyl-CoAmalonate:CoA ligase (AMP-forming)

Table of KEGG human pathways containing Malonic acid

Pathway IDHuman Pathway# of reactions
hsa00061 Fatty acid biosynthesis 1
hsa01212 Fatty acid metabolism 1
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