RefMet Compound Details

RefMet IDRM0053624
MW structure91050 (View MW Metabolite Database details)
RefMet namePC O-20:0/24:0
Alternative namePC(O-20:0/24:0)
Systematic name1-eicosyl-2-tetracosanoyl-sn-glycero-3-phosphocholine
SMILESCCCCCCCCCCCCCCCCCCCCCCCC(=O)O[C@H](COCCCCCCCCCCCCCCCCCCCC)COP(=O)([O-])OCC[N+](C)(C)C   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Sum CompositionPC O-44:0 View other entries in RefMet with this sum composition
Exact mass887.770692 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC52H106NO7PView other entries in RefMet with this formula
InChIInChI=1S/C52H106NO7P/c1-6-8-10-12-14-16-18-20-22-24-26-27-28-29-31-33-35-37-39-41-43-45-52(54)60-51(50-59-61(55,56)58-48-46-53(3,4
)5)49-57-47-44-42-40-38-36-34-32-30-25-23-21-19-17-15-13-11-9-7-2/h51H,6-50H2,1-5H3/t51-/m1/s1
InChIKeyHXXDKEXPZVCCHR-NLXJDERGSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassGlycerophospholipids
Main ClassGlycerophosphocholines
Sub ClassO-PC (Ether Phosphatidylcholines)
Pubchem CID145718019
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving PC O-20:0/24:0

Rxn IDKEGG ReactionEnzyme
R03438 Acyl-CoA + 1-Organyl-2-lyso-sn-glycero-3-phosphocholine <=> CoA + 1-Radyl-2-acyl-sn-glycero-3-phosphocholineAcyl-CoA:1-alkyl-sn-glycero-3-phosphocholine O-acyltransferase
R07387 1-Radyl-2-acyl-sn-glycero-3-phosphocholine + H2O <=> 1-Organyl-2-lyso-sn-glycero-3-phosphocholine + Carboxylateplasmanylcholine 2-acylhydrolase
R07389 1-Alkyl-2-acylglycerol + CDP-choline <=> 1-Radyl-2-acyl-sn-glycero-3-phosphocholine + CMP1-Alkyl-2-acylglycerol + CDP-choline <=> 1-Radyl-2-acyl-sn-glycero-3-phosphocholine + CMP

Table of KEGG human pathways containing PC O-20:0/24:0

Pathway IDHuman Pathway# of reactions
hsa00565 Ether lipid metabolism 3
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