RefMet Compound Details

RefMet IDRM0153759
MW structure2374 (View MW Metabolite Database details)
RefMet namePGD2
Systematic name9S,15S-dihydroxy-11-oxo-5Z,13E-prostadienoic acid
SMILESCCCCC[C@@H](/C=C/[C@@H]1[C@@H](C/C=CCCCC(=O)O)[C@H](CC1=O)O)O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass352.224975 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC20H32O5View other entries in RefMet with this formula
InChIInChI=1S/C20H32O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,15-18,21-22H,2-3,5-6,8-11,14H2,
1H3,(H,24,25)/b7-4-,13-12+/t15-,16+,17+,18-/m0/s1
InChIKeyBHMBVRSPMRCCGG-OUTUXVNYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassFatty Acyls
Main ClassEicosanoids
Sub ClassProstaglandins
Pubchem CID448457
ChEBI ID15555
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving PGD2

Rxn IDKEGG ReactionEnzyme
R02266 Prostaglandin H2 <=> Prostaglandin D2(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13- dienoate D-isomerase
R02799 11-epi-Prostaglandin F2alpha + NADP+ <=> Prostaglandin D2 + H+ + NADPH11-epi-Prostaglandin F2alpha:NADP+ 11-oxidoreductase

Table of KEGG human pathways containing PGD2

Pathway IDHuman Pathway# of reactions
hsa00590 Arachidonic acid metabolism 2
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