RefMet Compound Details

Created with Raphaƫl 2.1.0OHOHOHOOH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0139509
RefMet namePGF2beta
Systematic name9R,11R,15S-trihydroxy-5Z,13E-prostadienoic acid
SynonymsPubChem Synonyms
Sum CompositionFA 20:3;O3 View other entries in RefMet with this sum composition
Exact mass354.240625 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC20H34O5View other entries in RefMet with this formula
Molecular descriptors
Molfile2392 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,15-19,21-23H,2-3,5-6,8-11,14H2,
1H3,(H,24,25)/b7-4-,13-12+/t15-,16+,17+,18+,19+/m0/s1
InChIKeyPXGPLTODNUVGFL-JZFBHDEDSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCC[C@@H](/C=C/[C@@H]1[C@@H](C/C=C\CCCC(=O)O)[C@@H](C[C@H]1O)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassFatty Acyls
Main ClassEicosanoids
Sub ClassProstaglandins
Distribution of PGF2beta in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting PGF2beta
External Links
Pubchem CID5280506
LIPID MAPSLMFA03010025
ChEBI ID28922
KEGG IDC02314
HMDB IDHMDB0001483
Chemspider ID4444144
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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