RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0096758
RefMet namePS 39:0/4:0
Alternative namePS(39:0/4:0)
Systematic name1-nonatriacontanoyl-2-butyryl-sn-glycero-3-phosphoserine
SynonymsPubChem Synonyms
Sum CompositionPS 43:0 View other entries in RefMet with this sum composition
Exact mass889.677187 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC49H96NO10PView other entries in RefMet with this formula
Molecular descriptors
Molfile93016 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C49H96NO10P/c1-3-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-23-24-25-26-27-28-29-30-31-32-33-34-35-36-37-38-39-41-4
7(51)57-42-45(60-48(52)40-4-2)43-58-61(55,56)59-44-46(50)49(53)54/h45-46H,3-44,50H2,1-2H3,(H,53,54)(H,55,56)/t45-,46+/m1/s1
InChIKeyFTLKIQXOUFPVSR-LYINUXIMSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OC[C@@H](C(=O)O)N)OC(=O)CCC
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassGlycerophospholipids
Main ClassGlycerophosphoserines
Sub ClassPS (Phosphatidylserines)
Distribution of PS 39:0/4:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting PS 39:0/4:0
External Links
Pubchem CID145719826
LIPID MAPSLMGP20049EMJ
KEGG IDC02737
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving PS 39:0/4:0

Rxn IDKEGG ReactionEnzyme
R02055 Phosphatidylserine <=> Phosphatidylethanolamine + CO2Phsophatidyl-L-serine carboxy-lyase
R04034 Phosphatidylserine + H2O <=> 2-Acyl-sn-glycero-3-phosphoserine + Fatty acid3-sn-phosphatidyl-L-serine sn-1 acylhydrolase
R07376 Phosphatidylethanolamine + L-Serine <=> Phosphatidylserine + EthanolamineL-1-phosphatidylethanolamine:L-serine phosphatidyltransferase
R07377 Phosphatidylcholine + L-Serine <=> Phosphatidylserine + CholinePhosphatidylcholine + L-Serine <=> Phosphatidylserine + Choline
R09035 Acyl-CoA + 1-Acyl-sn-glycero-3-phosphoserine <=> CoA + Phosphatidylserineacyl-CoA:1-acyl-sn-glycero-3-phosphoserine O-acyltransferase

Table of KEGG human pathways containing PS 39:0/4:0

Pathway IDHuman Pathway# of reactions
hsa00564 Glycerophospholipid metabolism 5
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