RefMet Compound Details

Created with Raphaƫl 2.1.0OOHOHOOOHPOHOPOOHOOOHPOH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0155969
RefMet namePhosphoribosyl pyrophosphate
Systematic name{[(2R,3S,4R,5R)-3,4-dihydroxy-5-{[hydroxy(phosphonooxy)phosphoryl]oxy}oxolan-2-yl]methoxy}phosphonic acid
SynonymsPubChem Synonyms
Exact mass389.951824 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC5H13O14P3View other entries in RefMet with this formula
Molecular descriptors
Molfile37178 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C5H13O14P3/c6-3-2(1-16-20(8,9)10)17-5(4(3)7)18-22(14,15)19-21(11,12)13/h2-7H,1H2,(H,14,15)(H2,8,9,10)(H2,11,12,13)/t2-,3-
,4-,5-/m1/s1
InChIKeyPQGCEDQWHSBAJP-TXICZTDVSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC([C@@H]1[C@H]([C@H]([C@H](O1)OP(=O)(O)OP(=O)(O)O)O)O)OP(=O)(O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassCarbohydrates
Main ClassMonosaccharides
Sub ClassPentose phosphates
Distribution of Phosphoribosyl pyrophosphate in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Phosphoribosyl pyrophosphate
External Links
Pubchem CID7339
ChEBI ID17111
KEGG IDC00119
HMDB IDHMDB0000280
Chemspider ID7062
MetaCyc IDPRPP
EPA CompToxDTXCID10207700
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Phosphoribosyl pyrophosphate

Rxn IDKEGG ReactionEnzyme
R01049 ATP + D-Ribose 5-phosphate <=> AMP + 5-Phospho-alpha-D-ribose 1-diphosphateATP:D-ribose-5-phosphate diphosphotransferase

Table of KEGG human pathways containing Phosphoribosyl pyrophosphate

Pathway IDHuman Pathway# of reactions
hsa00230 Purine metabolism 2
hsa00030 Pentose phosphate pathway 1
hsa00240 Pyrimidine metabolism 1
hsa00250 Alanine, aspartate and glutamate metabolism 1
hsa01200 Carbon metabolism 1
hsa01230 Biosynthesis of amino acids 1
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