RefMet Compound Details

MW structure37384 (View MW Metabolite Database details)
RefMet namePipecolic acid
Systematic name(2S)-piperidine-2-carboxylic acid
SMILESOC(=O)[C@@H]1CCCCN1
Exact mass129.078979 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC6H11NO2View other entries in RefMet with this formula
InChIInChI=1S/C6H11NO2/c8-6(9)5-3-1-2-4-7-5/h5,7H,1-4H2,(H,8,9)/t5-/m0/s1
InChIKeyHXEACLLIILLPRG-YFKPBYRVSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassOrganic acids
Main ClassAmino acids and peptides
Sub ClassAmino acids
Pubchem CID439227
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Pipecolic acid

Rxn IDKEGG ReactionEnzyme
R02205 L-Pipecolate + FAD <=> FADH2 + (S)-2,3,4,5-Tetrahydropyridine-2-carboxylateL-Pipecolate:(acceptor) 1,6-oxidoreductase
R02204 L-Pipecolate + Oxygen <=> (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate + Hydrogen peroxideL-Pipecolate:oxygen 1,6-oxidoreductase
R08414 (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate <=> L-Pipecolate(S)-2,3,4,5-Tetrahydropyridine-2-carboxylate <=> L-Pipecolate

Table of KEGG human pathways containing Pipecolic acid

Pathway IDHuman Pathway# of reactions
hsa00310 Lysine degradation 1
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