RefMet Compound Details

Created with Raphaƫl 2.1.0OHOHNH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0037094
RefMet nameRetronecine
Systematic name(1R,8R)-7-(hydroxymethyl)-2,3,5,8-tetrahydro-1H-pyrrolizin-1-ol
SynonymsPubChem Synonyms
Exact mass155.094629 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC8H13NO2View other entries in RefMet with this formula
Molecular descriptors
Molfile67588 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C8H13NO2/c10-5-6-1-3-9-4-2-7(11)8(6)9/h1,7-8,10-11H,2-5H2/t7-,8-/m1/s1
InChIKeyHJSJELVDQOXCHO-HTQZYQBOSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC1=C(CO)[C@@H]2[C@@H](CCN2C1)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassOrganoheterocyclic compounds
Main ClassPyrrolizines
Sub ClassPyrrolizines
Distribution of Retronecine in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Retronecine
External Links
Pubchem CID10198
ChEBI ID8821
KEGG IDC06177
MetaCyc IDCPD-13504
Spectral data for Retronecine standards
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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