RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0138819
RefMet nameRifamycin
Systematic name[(7S,9E,11S,12R,13S,14R,15R,16R,17S,18S,19E,21Z)-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22-heptamethyl-6,23-dioxo-8,30-dioxa-24-azatetracyclo[23.3.1.14,7.05,28]triaconta-1(29),2,4,9,19,21,25,27-octaen-13-yl]acetate
SynonymsPubChem Synonyms
Exact mass697.309829 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC37H47NO12View other entries in RefMet with this formula
Molecular descriptors
Molfile21319 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C37H47NO12/c1-16-11-10-12-17(2)36(46)38-23-15-24(40)26-27(32(23)44)31(43)21(6)34-28(26)35(45)37(8,50-34)48-14-13-25(47-9)
18(3)33(49-22(7)39)20(5)30(42)19(4)29(16)41/h10-16,18-20,25,29-30,33,40-44H,1-9H3,(H,38,46)/b11-10+,14-13+,17-12-/t16-,18+,19+,20+
,25-,29-,30+,33+,37-/m0/s1
InChIKeyHJYYPODYNSCCOU-ODRIEIDWSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC[C@H]1/C=C/C=C(/C)\C(=O)Nc2cc(c3c(c(c(C)c4c3C(=O)[C@@](C)(O/C=C/[C@@H]([C@@H](C)[C@H]([C@H](C)[C@@H]([C@H](C)[C@H]1O)O)OC(=O)C)OC)O4)O)c2O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassPolyketides
Main ClassAnsamycins
Sub ClassAnsamycins
Distribution of Rifamycin in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting Rifamycin
External Links
Pubchem CID6324616
LIPID MAPSLMPK05000005
ChEBI ID29673
KEGG IDC12044
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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