RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0139335
RefMet nameSM 18:1;O2/28:0
Alternative nameSM(d18:1/28:0)
Systematic nameN-(octacosanoyl)-4E-sphingenine-1-phosphocholine
SynonymsPubChem Synonyms
Sum CompositionSM 46:1;O2 View other entries in RefMet with this sum composition
Exact mass870.755376 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC51H103N2O6PView other entries in RefMet with this formula
Molecular descriptors
Molfile93426 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C51H103N2O6P/c1-6-8-10-12-14-16-18-20-21-22-23-24-25-26-27-28-29-30-31-33-35-37-39-41-43-45-51(55)52-49(48-59-60(56,57)58
-47-46-53(3,4)5)50(54)44-42-40-38-36-34-32-19-17-15-13-11-9-7-2/h42,44,49-50,54H,6-41,43,45-48H2,1-5H3,(H-,52,55,56,57)/b44-42+/t4
9-,50+/m0/s1
InChIKeyRZFSTLQDWORRNW-GRTHQCPDSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](COP(=O)([O-])OCC[N+](C)(C)C)[C@@H](/C=C/CCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassPhosphosphingolipids
Sub ClassSM (Sphingomyelins)
Distribution of SM 18:1;O2/28:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting SM 18:1;O2/28:0
External Links
Pubchem CID145720208
LIPID MAPSLMSP03019BYM
ChEBI ID72499
KEGG IDC00550
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving SM 18:1;O2/28:0

Rxn IDKEGG ReactionEnzyme
R01891 CDP-choline + N-Acylsphingosine <=> CMP + SphingomyelinCDP-choline:N-acylsphingosine cholinephosphotransferase
R02541 Sphingomyelin + H2O <=> N-Acylsphingosine + Choline phosphateSphingomyelin cholinephosphohydrolase
R08969 N-Acylsphingosine + Phosphatidylcholine <=> Sphingomyelin + 1,2-Diacyl-sn-glycerolceramide:phosphatidylcholine cholinephosphotransferase

Table of KEGG human pathways containing SM 18:1;O2/28:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 2
hsa01100 Metabolic pathways 1
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