RefMet Compound Details

Created with Raphaël 2.1.0HNHOON+POOOOHH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0024566
RefMet nameSM 19:1;O2/12:0
Alternative nameSM(d19:1/12:0)
Systematic nameN-(dodecanoyl)-4E-nonadecasphingenine-1-phosphocholine
SynonymsPubChem Synonyms
Sum CompositionSM 31:1;O2 View other entries in RefMet with this sum composition
Exact mass660.520626 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC36H73N2O6PView other entries in RefMet with this formula
Molecular descriptors
Molfile93469 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C36H73N2O6P/c1-6-8-10-12-14-16-17-18-19-20-22-23-25-27-29-35(39)34(33-44-45(41,42)43-32-31-38(3,4)5)37-36(40)30-28-26-24-
21-15-13-11-9-7-2/h27,29,34-35,39H,6-26,28,30-33H2,1-5H3,(H-,37,40,41,42)/b29-27+/t34-,35+/m0/s1
InChIKeyOJTYOKQMJDQPTL-WSYRTZMQSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCC/C=C/[C@H]([C@H](COP(=O)([O-])OCC[N+](C)(C)C)NC(=O)CCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassPhosphosphingolipids
Sub ClassSM (Sphingomyelins)
Distribution of SM 19:1;O2/12:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting SM 19:1;O2/12:0
External Links
Pubchem CID134755393
LIPID MAPSLMSP03019CAN
KEGG IDC00550
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving SM 19:1;O2/12:0

Rxn IDKEGG ReactionEnzyme
R01891 CDP-choline + N-Acylsphingosine <=> CMP + SphingomyelinCDP-choline:N-acylsphingosine cholinephosphotransferase
R02541 Sphingomyelin + H2O <=> N-Acylsphingosine + Choline phosphateSphingomyelin cholinephosphohydrolase
R08969 N-Acylsphingosine + Phosphatidylcholine <=> Sphingomyelin + 1,2-Diacyl-sn-glycerolceramide:phosphatidylcholine cholinephosphotransferase

Table of KEGG human pathways containing SM 19:1;O2/12:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 2
hsa01100 Metabolic pathways 1
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