RefMet Compound Details
RefMet ID, RefMet name, exact mass and formula | ||
RefMet ID | RM0059008 | |
---|---|---|
RefMet name | SM 20:1;O2/34:0 | |
Alternative name | SM(d20:1/34:0) | |
Systematic name | N-(tetratriacontanoyl)-4E-eicosasphingenine-1-phosphocholine | |
Synonyms | PubChem Synonyms | |
Sum Composition | SM 54:1;O2 | View other entries in RefMet with this sum composition |
Exact mass | 982.880576 (neutral) | Calculate m/z:
View other RefMet entries with this exact (neutral) mass: +/- 0.05 amu +/- 0.1 amu +/- 0.2 amu +/- 0.5 amu |
Formula | C59H119N2O6P | View other entries in RefMet with this formula |
Molecular descriptors | ||
Molfile | 93545 (Download molfile/View MW Metabolite Database details) | |
InChI | InChI=1S/C59H119N2O6P/c1-6-8-10-12-14-16-18-20-22-23-24-25-26-27-28-29-30-31-32-33-34-35-36-37-39-41-43-45-47-49-51-53-59(63)60-57 (56-67-68(64,65)66-55-54-61(3,4)5)58(62)52-50-48-46-44-42-40-38-21-19-17-15-13-11-9-7-2/h50,52,57-58,62H,6-49,51,53-56H2,1-5H3,(H- ,60,63,64,65)/b52-50+/t57-,58+/m0/s1 | |
InChIKey | VRBMSQULNPGHIS-DSKIWINUSA-N | View other enantiomers/diastereomers of this metabolite in RefMet |
SMILES | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](COP(=O)([O-])OCC[N+](C)(C)C)[C@@H](/C=C/CCCCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6) | |
Chemical/Biochemical Classification | ||
Super Class | Sphingolipids | |
Main Class | Phosphosphingolipids | |
Sub Class | SM (Sphingomyelins) | |
Distribution of SM 20:1;O2/34:0 in NMDR studies | ||
Species | Plot Species distribution | |
Sample source | Plot Sample source(tissue) distribution | |
Platform | Platform (MS/NMR) used for detection | |
Chromatography | Chromatography methods used for detection | |
Studies | NMDR Studies reporting SM 20:1;O2/34:0 | |
External Links | ||
Pubchem CID | 145720340 | |
LIPID MAPS | LMSP03019COS | |
KEGG ID | C00550 | |
Structural annotation level | ||
Annotation level | 1 (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition) |
Table of KEGG reactions in human pathways involving SM 20:1;O2/34:0
Rxn ID | KEGG Reaction | Enzyme |
---|---|---|
R01891 | CDP-choline + N-Acylsphingosine <=> CMP + Sphingomyelin | CDP-choline:N-acylsphingosine cholinephosphotransferase |
R02541 | Sphingomyelin + H2O <=> N-Acylsphingosine + Choline phosphate | Sphingomyelin cholinephosphohydrolase |
R08969 | N-Acylsphingosine + Phosphatidylcholine <=> Sphingomyelin + 1,2-Diacyl-sn-glycerol | ceramide:phosphatidylcholine cholinephosphotransferase |
Table of KEGG human pathways containing SM 20:1;O2/34:0
Pathway ID | Human Pathway | # of reactions |
---|---|---|
hsa00600 | Sphingolipid metabolism | 2 |
hsa01100 | Metabolic pathways | 1 |