RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0125838
RefMet nameSM 21:1;O2/20:0
Alternative nameSM(d21:1/20:0)
Systematic nameN-(eicosanoyl)-4E-heneicosasphingenine-1-phosphocholine
SynonymsPubChem Synonyms
Sum CompositionSM 41:1;O2 View other entries in RefMet with this sum composition
Exact mass800.677126 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC46H93N2O6PView other entries in RefMet with this formula
Molecular descriptors
Molfile93591 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C46H93N2O6P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-36-38-40-46(50)47-44(43-54-55(51,52)53-42-41-48(3,4)5)45(49)39-
37-35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h37,39,44-45,49H,6-36,38,40-43H2,1-5H3,(H-,47,50,51,52)/b39-37+/t44-,45+/m0/s1
InChIKeyDEZUMHSCNAGNPE-NMIJJABPSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](COP(=O)([O-])OCC[N+](C)(C)C)[C@@H](/C=C/CCCCCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassPhosphosphingolipids
Sub ClassSM (Sphingomyelins)
Distribution of SM 21:1;O2/20:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting SM 21:1;O2/20:0
External Links
Pubchem CID134726444
LIPID MAPSLMSP03019CYX
KEGG IDC00550
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving SM 21:1;O2/20:0

Rxn IDKEGG ReactionEnzyme
R01891 CDP-choline + N-Acylsphingosine <=> CMP + SphingomyelinCDP-choline:N-acylsphingosine cholinephosphotransferase
R02541 Sphingomyelin + H2O <=> N-Acylsphingosine + Choline phosphateSphingomyelin cholinephosphohydrolase
R08969 N-Acylsphingosine + Phosphatidylcholine <=> Sphingomyelin + 1,2-Diacyl-sn-glycerolceramide:phosphatidylcholine cholinephosphotransferase

Table of KEGG human pathways containing SM 21:1;O2/20:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 2
hsa01100 Metabolic pathways 1
  logo