RefMet Compound Details

Created with Raphaël 2.1.0HNHOON+POOOOHH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0060425
RefMet nameSM 22:1;O2/25:0
Alternative nameSM(d22:1/25:0)
Systematic nameN-(pentacosanoyl)-4E-docosasphingenine-1-phosphocholine
SynonymsPubChem Synonyms
Sum CompositionSM 47:1;O2 View other entries in RefMet with this sum composition
Exact mass884.771026 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC52H105N2O6PView other entries in RefMet with this formula
Molecular descriptors
Molfile93656 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C52H105N2O6P/c1-6-8-10-12-14-16-18-20-22-24-25-26-27-28-30-32-34-36-38-40-42-44-46-52(56)53-50(49-60-61(57,58)59-48-47-54
(3,4)5)51(55)45-43-41-39-37-35-33-31-29-23-21-19-17-15-13-11-9-7-2/h43,45,50-51,55H,6-42,44,46-49H2,1-5H3,(H-,53,56,57,58)/b45-43+
/t50-,51+/m0/s1
InChIKeyRBNURXPXFPSAOI-LUUSUAITSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](COP(=O)([O-])OCC[N+](C)(C)C)[C@@H](/C=C/CCCCCCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassPhosphosphingolipids
Sub ClassSM (Sphingomyelins)
Distribution of SM 22:1;O2/25:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting SM 22:1;O2/25:0
External Links
Pubchem CID134763125
LIPID MAPSLMSP03019DBI
KEGG IDC00550
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving SM 22:1;O2/25:0

Rxn IDKEGG ReactionEnzyme
R01891 CDP-choline + N-Acylsphingosine <=> CMP + SphingomyelinCDP-choline:N-acylsphingosine cholinephosphotransferase
R02541 Sphingomyelin + H2O <=> N-Acylsphingosine + Choline phosphateSphingomyelin cholinephosphohydrolase
R08969 N-Acylsphingosine + Phosphatidylcholine <=> Sphingomyelin + 1,2-Diacyl-sn-glycerolceramide:phosphatidylcholine cholinephosphotransferase

Table of KEGG human pathways containing SM 22:1;O2/25:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 2
hsa01100 Metabolic pathways 1
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