RefMet Compound Details

Created with Raphaƫl 2.1.0OOHOHOOHOOOHOOH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0139070
RefMet nameSilibinin
Systematic name(2R,3R)-3,5,7-trihydroxy-2-[(2R,3R)-3-(4-hydroxy-3-methoxyphenyl)-2-(hydroxymethyl)-2,3-dihydro-1,4-benzodioxin-6-yl]-2,3-dihydro-4H-chromen-4-one
SynonymsPubChem Synonyms
Exact mass482.121300 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC25H22O10View other entries in RefMet with this formula
Molecular descriptors
Molfile53434 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C25H22O10/c1-32-17-6-11(2-4-14(17)28)24-20(10-26)33-16-5-3-12(7-18(16)34-24)25-23(31)22(30)21-15(29)8-13(27)9-19(21)35-25
/h2-9,20,23-29,31H,10H2,1H3/t20-,23+,24-,25-/m1/s1
InChIKeySEBFKMXJBCUCAI-HKTJVKLFSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCOc1cc(ccc1O)[C@@H]1[C@@H](CO)Oc2ccc(cc2O1)[C@@H]1[C@H](C(=O)c2c(cc(cc2O1)O)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassLignans
Main ClassFlavonolignans
Sub ClassFlavonolignans
Distribution of Silibinin in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Silibinin
External Links
Pubchem CID31553
LIPID MAPSLMPK12140712
ChEBI ID9144
KEGG IDC07610
HMDB IDHMDB0030583
NPAtlas DBNP001288
Spectral data for Silibinin standards
NP-MRD ID(NMR)View NMR spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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