RefMet Compound Details

MW structure37553 (View MW Metabolite Database details)
RefMet nameUDP-D-Xylose
Systematic name{[(2R,3S,4R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}({[hydroxy({[(3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy})phosphoryl]oxy})phosphinic acid
SMILESc1cn([C@H]2[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OC3[C@@H]([C@H]([C@@H](CO3)O)O)O)O2)O)O)c(=O)[nH]c1=O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass536.044464 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC14H22N2O16P2View other entries in RefMet with this formula
InChIInChI=1S/C14H22N2O16P2/c17-5-3-28-13(11(22)8(5)19)31-34(26,27)32-33(24,25)29-4-6-9(20)10(21)12(30-6)16-2-1-7(18)15-14(16)23/h1-2,5
-6,8-13,17,19-22H,3-4H2,(H,24,25)(H,26,27)(H,15,18,23)/t5-,6-,8+,9-,10-,11-,12-,13?/m1/s1
InChIKeyDQQDLYVHOTZLOR-WZNRFRBMSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine rNDP
Pubchem CID11857306
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving UDP-D-Xylose

Rxn IDKEGG ReactionEnzyme
R01384 UDP-glucuronate <=> UDP-D-xylose + CO2UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming)

Table of KEGG human pathways containing UDP-D-Xylose

Pathway IDHuman Pathway# of reactions
hsa00520 Amino sugar and nucleotide sugar metabolism 1
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