RefMet Compound Details

Created with Raphaƫl 2.1.0OOHOOHNONHOOHOHOHOOHOOOOPOHPOHO
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0157921
RefMet nameUDP-glucuronic acid
Systematic name(2S,3S,4S,5R,6R)-6-({[({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-3,4,5-trihydroxyoxane-2-carboxylic acid
SynonymsPubChem Synonyms
Exact mass580.034294 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC15H22N2O18P2View other entries in RefMet with this formula
Molecular descriptors
Molfile37509 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C15H22N2O18P2/c18-5-1-2-17(15(26)16-5)12-9(22)6(19)4(32-12)3-31-36(27,28)35-37(29,30)34-14-10(23)7(20)8(21)11(33-14)13(24
)25/h1-2,4,6-12,14,19-23H,3H2,(H,24,25)(H,27,28)(H,29,30)(H,16,18,26)/t4-,6-,7+,8+,9-,10-,11+,12-,14-/m1/s1
InChIKeyHDYANYHVCAPMJV-LXQIFKJMSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESc1cn([C@H]2[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@@H](C(=O)O)O3)O)O)O)O2)O)O)c(=O)[nH]c1=O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine rNDP
Distribution of UDP-glucuronic acid in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting UDP-glucuronic acid
External Links
Pubchem CID17473
ChEBI ID17200
KEGG IDC00167
HMDB IDHMDB0000935
Chemspider ID16522
MetaCyc IDUDP-GLUCURONATE
Spectral data for UDP-glucuronic acid standards
BMRB ID(NMR)View NMR spectra
NP-MRD ID(NMR)View NMR spectra
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving UDP-glucuronic acid

Rxn IDKEGG ReactionEnzyme
R00286 UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 2 H+UDP-glucose:NAD+ 6-oxidoreductase
R01383 UDP-glucuronate + ROH <=> UDP + beta-D-GlucuronosideUDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)
R01384 UDP-glucuronate <=> UDP-D-xylose + CO2UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming)
R08615 UDP-glucuronate + H2O <=> UDP + D-GlucuronateUDP-glucuronate glucuronohydrolase

Table of KEGG human pathways containing UDP-glucuronic acid

Pathway IDHuman Pathway# of reactions
hsa00040 Pentose and glucuronate interconversions 2
hsa00053 Ascorbate and aldarate metabolism 2
hsa00520 Amino sugar and nucleotide sugar metabolism 2
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