RefMet Compound Details
RefMet ID, RefMet name, exact mass and formula | ||
RefMet ID | RM0157921 | |
---|---|---|
RefMet name | UDP-glucuronic acid | |
Systematic name | (2S,3S,4S,5R,6R)-6-({[({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-3,4,5-trihydroxyoxane-2-carboxylic acid | |
Synonyms | PubChem Synonyms | |
Exact mass | 580.034294 (neutral) | Calculate m/z:
View other RefMet entries with this exact (neutral) mass: +/- 0.05 amu +/- 0.1 amu +/- 0.2 amu +/- 0.5 amu |
Formula | C15H22N2O18P2 | View other entries in RefMet with this formula |
Molecular descriptors | ||
Molfile | 37509 (Download molfile/View MW Metabolite Database details) | |
InChI | InChI=1S/C15H22N2O18P2/c18-5-1-2-17(15(26)16-5)12-9(22)6(19)4(32-12)3-31-36(27,28)35-37(29,30)34-14-10(23)7(20)8(21)11(33-14)13(24 )25/h1-2,4,6-12,14,19-23H,3H2,(H,24,25)(H,27,28)(H,29,30)(H,16,18,26)/t4-,6-,7+,8+,9-,10-,11+,12-,14-/m1/s1 | |
InChIKey | HDYANYHVCAPMJV-LXQIFKJMSA-N | View other enantiomers/diastereomers of this metabolite in RefMet |
SMILES | c1cn([C@H]2[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@@H](C(=O)O)O3)O)O)O)O2)O)O)c(=O)[nH]c1=O
Run Tanimoto similarity search (with similarity coefficient >=0.6) | |
Chemical/Biochemical Classification | ||
Super Class | Nucleic acids | |
Main Class | Pyrimidines | |
Sub Class | Pyrimidine rNDP | |
Distribution of UDP-glucuronic acid in NMDR studies | ||
Species | Plot Species distribution | |
Sample source | Plot Sample source(tissue) distribution | |
Platform | Platform (MS/NMR) used for detection | |
Chromatography | Chromatography methods used for detection | |
Studies | NMDR Studies reporting UDP-glucuronic acid | |
External Links | ||
Pubchem CID | 17473 | |
ChEBI ID | 17200 | |
KEGG ID | C00167 | |
HMDB ID | HMDB0000935 | |
Chemspider ID | 16522 | |
MetaCyc ID | UDP-GLUCURONATE | |
Spectral data for UDP-glucuronic acid standards | ||
BMRB ID(NMR) | View NMR spectra | |
NP-MRD ID(NMR) | View NMR spectra | |
MassBank(EU) | View MS spectra | |
Structural annotation level | ||
Annotation level | 1 (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition) |
Table of KEGG reactions in human pathways involving UDP-glucuronic acid
Rxn ID | KEGG Reaction | Enzyme |
---|---|---|
R00286 | UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 2 H+ | UDP-glucose:NAD+ 6-oxidoreductase |
R01383 | UDP-glucuronate + ROH <=> UDP + beta-D-Glucuronoside | UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) |
R01384 | UDP-glucuronate <=> UDP-D-xylose + CO2 | UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming) |
R08615 | UDP-glucuronate + H2O <=> UDP + D-Glucuronate | UDP-glucuronate glucuronohydrolase |
Table of KEGG human pathways containing UDP-glucuronic acid
Pathway ID | Human Pathway | # of reactions |
---|---|---|
hsa00040 | Pentose and glucuronate interconversions | 2 |
hsa00053 | Ascorbate and aldarate metabolism | 2 |
hsa00520 | Amino sugar and nucleotide sugar metabolism | 2 |