RefMet Compound Details

Created with Raphaƫl 2.1.0NNOONH2OH
RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0010972
RefMet nameZalcitabine
Systematic name4-amino-1-[(2R,5S)-5-(hydroxymethyl)oxolan-2-yl]-1,2-dihydropyrimidin-2-one
SynonymsPubChem Synonyms
Exact mass211.095692 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC9H13N3O3View other entries in RefMet with this formula
Molecular descriptors
Molfile43203 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C9H13N3O3/c10-7-3-4-12(9(14)11-7)8-2-1-6(5-13)15-8/h3-4,6,8,13H,1-2,5H2,(H2,10,11,14)/t6-,8+/m0/s1
InChIKeyWREGKURFCTUGRC-POYBYMJQSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC1C[C@H](n2ccc(N)nc2=O)O[C@@H]1CO
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine ribonucleosides
Distribution of Zalcitabine in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Zalcitabine
External Links
Pubchem CID24066
ChEBI ID10101
KEGG IDC07207
HMDB IDHMDB0015078
Chemspider ID22498
EPA CompToxDTXCID20209351
Spectral data for Zalcitabine standards
BMRB ID(NMR)View NMR spectra
NP-MRD ID(NMR)View NMR spectra
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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