RefMet Compound Details

RefMet ID	RM0138933
MW structure	37540 (View MW Metabolite Database details)
RefMet name	dUDP
Systematic name	[({[(2R,3S,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid
SMILES	c1cn([C@H]2C[C@@H]([C@@H](COP(=O)(O)OP(=O)(O)O)O2)O)c(=O)[nH]c1=O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass	388.007289 (neutral)	Calculate m/z: (Choose adduct) [M+H]+ [M+H-H2O]+ [M.]+ [M+2H]2+ [M+3H]3+ [M+4H]4+ [M+K]+ [M+2K]2+ [M+2K-H]+ [M+Na]+ [M+2Na]2+ [M+2Na-H]+ [M+Li]+ [M+2Li]2+ [M+NH4]+ [M.CH3]+ [M+Ag]+ [M+H+CH3OH]+ [M+H+CH3CN]+ [M+H+2CH3CN]+ [M+Na+CH3CN]+ [M.NaFormate+H]+ [M.NH4Formate+H]+ [M.TMSi]+ [M.tBuDMSi]+ [M+H-Hexose]+ [M+H-EtnP]+ [M+H-SerP]+ [M-H]- [M-H-H2O]- [M-CH3]- [M-2H]2- [M-3H]3- [M-4H]4- [M+Cl]- [M+OAc]- [M+Na-2H]- [M+K-2H]- [M.Formate]- [M.NaFormate-H]- [M.NH4Formate-H]- [M.F]- [M-H-Ser]- [M.HF2]- M(neutral)    View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
Formula	C9H14N2O11P2	View other entries in RefMet with this formula
InChI	InChI=1S/C9H14N2O11P2/c12-5-3-8(11-2-1-7(13)10-9(11)14)21-6(5)4-20-24(18,19)22-23(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,10,13, 14)(H2,15,16,17)/t5-,6+,8+/m0/s1
InChIKey	QHWZTVCCBMIIKE-SHYZEUOFSA-N	View other enantiomers/diastereomers of this metabolite in RefMet
Super Class	Nucleic acids
Main Class	Pyrimidines
Sub Class	Pyrimidine dNDP
Pubchem CID	145729
ChEBI ID	28850
Annotation level	1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving dUDP

Rxn ID	KEGG Reaction	Enzyme
R02018	dUDP + Thioredoxin disulfide + H2O <=> Thioredoxin + UDP	2'-Deoxyuridine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase
R02098	ATP + dUMP <=> ADP + dUDP	ATP:dUMP phosphotransferase
R02330	dUTP + H2O <=> dUDP + Orthophosphate	dUTP nucleotidohydrolase
R02331	ATP + dUDP <=> ADP + dUTP	ATP:dUDP phosphotransferase

Table of KEGG human pathways containing dUDP

Pathway ID	Human Pathway	# of reactions
hsa00240	Pyrimidine metabolism	3
hsa01100	Metabolic pathways	1