Summary of Study ST000956
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000657. The data can be accessed directly via it's Project DOI: 10.21228/M8RD64 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST000956 |
Study Title | Determine metabolomics signatures important for the ability of Streptococus gallolyticus to promote colon cancer cell proliferation |
Study Summary | HT29 cells were treated with Sg TX20005 stationary phase, Sg TX20005 exponential phase (negative control), and Sg TX20008 stationary phase (negative control), and media only (baseline control). The cells were washed and aliquoted. One aliquot was pelleted and stored at -80C for metabolomics analysis. DNA was also extracted from the other aliquot for DNA methylation studies. |
Institute | University of Florida |
Department | SECIM |
Last Name | Xu |
First Name | Yi |
Address | 2121 W. Holcombe Blvd., Houston, TX 77030 |
yxu@ibt.tamhsc.edu | |
Phone | NA |
Submit Date | 2018-04-14 |
Num Groups | 4 |
Total Subjects | 40 |
Study Comments | SECIM pilot and feasibility, NIH U24 DK097209 |
Raw Data Available | Yes |
Raw Data File Type(s) | raw(Thermo) |
Analysis Type Detail | LC-MS |
Release Date | 2019-05-15 |
Release Version | 1 |
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Treatment:
Treatment ID: | TR001009 |
Treatment Summary: | HT29 cells were co-cultured with S. streptococcus gallolyticus strains TX20008 (stationary phase), TX20005 (Stationary phase) and TX20005 (Exponential phase). Cell storage: After collection ells were stored at -80 C Cell growth container:10 cm plates Cell percent confluence:80% Cell media: F12/DMEM 1:1 + 10% FBS Cell harvesting: Trypisinization |