Summary of Study ST000956

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000657. The data can be accessed directly via it's Project DOI: 10.21228/M8RD64 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST000956
Study TitleDetermine metabolomics signatures important for the ability of Streptococus gallolyticus to promote colon cancer cell proliferation
Study SummaryHT29 cells were treated with Sg TX20005 stationary phase, Sg TX20005 exponential phase (negative control), and Sg TX20008 stationary phase (negative control), and media only (baseline control). The cells were washed and aliquoted. One aliquot was pelleted and stored at -80C for metabolomics analysis. DNA was also extracted from the other aliquot for DNA methylation studies.
Institute
University of Florida
DepartmentSECIM
Last NameXu
First NameYi
Address2121 W. Holcombe Blvd., Houston, TX 77030
Emailyxu@ibt.tamhsc.edu
PhoneNA
Submit Date2018-04-14
Num Groups4
Total Subjects40
Study CommentsSECIM pilot and feasibility, NIH U24 DK097209
Raw Data AvailableYes
Raw Data File Type(s)raw(Thermo)
Analysis Type DetailLC-MS
Release Date2019-05-15
Release Version1
Yi Xu Yi Xu
https://dx.doi.org/10.21228/M8RD64
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id Treatment
SA057251HT29-TX08-5Condition-1
SA057252HT29-TX08-4Condition-1
SA057253HT29-TX08-1Condition-1
SA057254HT29-TX08-6Condition-1
SA057255HT29-TX08-3Condition-1
SA057256HT29-TX08-7Condition-1
SA057257HT29-TX08-10Condition-1
SA057258HT29-TX08-9Condition-1
SA057259HT29-TX08-8Condition-1
SA057260HT29-TX08-2Condition-1
SA057261HT29-TX05-S-3Condition-2
SA057262HT29-TX05-S-8Condition-2
SA057263HT29-TX05-S-9Condition-2
SA057264HT29-TX05-S-10Condition-2
SA057265HT29-TX05-S-7Condition-2
SA057266HT29-TX05-S-6Condition-2
SA057267HT29-TX05-S-4Condition-2
SA057268HT29-TX05-S-5Condition-2
SA057269HT29-TX05-S-2Condition-2
SA057270HT29-TX05-S-1Condition-2
SA057271HT29-TX05-E-5Condition-3
SA057272HT29-TX05-E-4Condition-3
SA057273HT29-TX05-E-3Condition-3
SA057274HT29-TX05-E-6Condition-3
SA057275HT29-TX05-E-7Condition-3
SA057276HT29-TX05-E-10Condition-3
SA057277HT29-TX05-E-9Condition-3
SA057278HT29-TX05-E-8Condition-3
SA057279HT29-TX05-E-2Condition-3
SA057280HT29-TX05-E-1Condition-3
SA057281HT29-8Control
SA057282HT29-9Control
SA057283HT29-10Control
SA057284HT29-2Control
SA057285HT29-7Control
SA057286HT29-6Control
SA057287HT29-3Control
SA057288HT29-4Control
SA057289HT29-5Control
SA057290HT29-1Control
Showing results 1 to 40 of 40
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