Return to study ST001738 main page

MB Sample ID: SA162941

Local Sample ID:VAT (ob)3
Subject ID:SU001815
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606

Select appropriate tab below to view additional metadata details:


Combined analysis:

Analysis ID AN002829 AN002830 AN002831
Analysis type MS MS MS
Chromatography type Reversed phase Reversed phase HILIC
Chromatography system Vanquish Horizon Vanquish Horizon Vanquish Horizon
Column Thermo Accucore C30 (150 x 2.1mm,2.6um) Thermo Accucore C18 (150 x 2.1mm,2.6um) Waters ACQUITY UPLC BEH HILIC (100 x 1.0mm,1.7um,130 Å)
MS Type ESI ESI ESI
MS instrument type Orbitrap Orbitrap Orbitrap
MS instrument name Thermo Q Exactive Plus Orbitrap; Thermo Fusion Orbitrap Thermo Q Exactive Plus Orbitrap Thermo Q Exactive Plus Orbitrap
Ion Mode UNSPECIFIED UNSPECIFIED POSITIVE
Units fmol/μg protein fmol/μg protein fmol/μg protein

Chromatography:

Chromatography ID:CH002092
Chromatography Summary:Three chromatography types were employed to allow for optimal lipidome separation (i.e. C18 RPC for amphiphilic lipids, C30 RPC for triacylglycerols, HILIC for acylcarnitines). All details on the respective methods are provided in the attached methods document
Instrument Name:Vanquish Horizon
Column Name:Thermo Accucore C30 (150 x 2.1mm,2.6um)
Column Temperature:50
Flow Gradient:0-5 min - 50 to 80 % B (curve 5), 5-22 min - 80 to 95 % B (curve 4), 22-26 min - 95 % isocratic, 26-27 min - 95 to 100 % B (curve 5), 27-47 min - 100 % B isocratic, 47-47.1 min - 100 to 50 % B followed by 8 min re-equilibration at 50% B
Flow Rate:0.3 ml/min
Solvent A:50% acetonitrile/50% water; 0.1% formic acid; 5 mM ammonium formate
Solvent B:85% isopropanol/10% acetonitrile/5% water; 0.1% formic acid; 5 mM ammonium formate
Chromatography Type:Reversed phase
  
Chromatography ID:CH002093
Chromatography Summary:Three chromatography types were employed to allow for optimal lipidome separation (i.e. C18 RPC for amphiphilic lipids, C30 RPC for triacylglycerols, HILIC for acylcarnitines). All details on the respective methods are provided in the attached methods document
Instrument Name:Vanquish Horizon
Column Name:Thermo Accucore C18 (150 x 2.1mm,2.6um)
Column Temperature:50
Flow Gradient:0-5 min - 50 to 80 % B (curve 5), 5-22 min - 80 to 95 % B (curve 4), 22-26 min - 95 % isocratic, 26-27 min - 95 to 100 % B (curve 5), 27-47 min - 100 % B isocratic, 47-47.1 min - 100 to 50 % B followed by 8 min re-equilibration at 50% B
Flow Rate:0.3 ml/min
Solvent A:50% acetonitrile/50% water; 0.1% formic acid; 5 mM ammonium formate
Solvent B:85% isopropanol/10% acetonitrile/5% water; 0.1% formic acid; 5 mM ammonium formate
Chromatography Type:Reversed phase
  
Chromatography ID:CH002094
Chromatography Summary:Three chromatography types were employed to allow for optimal lipidome separation (i.e. C18 RPC for amphiphilic lipids, C30 RPC for triacylglycerols, HILIC for acylcarnitines). All details on the respective methods are provided in the attached methods document
Instrument Name:Vanquish Horizon
Column Name:Waters ACQUITY UPLC BEH HILIC (100 x 1.0mm,1.7um,130 Å)
Column Temperature:40
Flow Gradient:0-10 min - 0 to 10 % B (curve 5), 10-10.1 min - 10 to 0 % B (curve 5) followed by 5 min re-equilibration at 0% B
Flow Rate:0.15 ml/min
Solvent A:96% acetonitrile/4% water; 5 mM ammonium acetate
Solvent B:100% water; 5 mM ammonium acetate
Chromatography Type:HILIC
  logo