Summary of Study ST001105

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench,, where it has been assigned Project ID PR000739. The data can be accessed directly via it's Project DOI: 10.21228/M85675 This work is supported by NIH grant, U2C- DK119886.


Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  
Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data files (Contains raw data)
Study IDST001105
Study TitleRetinal ganglion cells lipid profiling
Study SummaryThe aim of this project was to characterize lipid profiles of the retinal ganglion cells (RGCs) with different regenerative capacity. RGCs were FACS-sorted (7,000 cells/sample) from mice of OPN4 Cre tdT and Thy1-CFP genotype. The treatment conditions included intact, optic nerve crush (ONC) and ONC plus CNTF to promote regeneration. Samples were then subject to lipid extraction and analyzed using LC-MS/MS, followed by identification and relative quantification in LipidSearch software.
University of Miami
DepartmentOphthalmology, Bascom Palmer Eye Institute
LaboratorySanjoy K. Bhattacharya
Last NameBhattacharya
First NameSanjoy
Address1638 NW 10th Ave, Miami, FL 33136
Phone+1 (305) 4824103
Submit Date2018-11-26
Raw Data AvailableYes
Raw Data File Type(s)raw(Thermo)
Analysis Type DetailLC-MS
Release Date2019-01-22
Release Version1
Sanjoy Bhattacharya Sanjoy Bhattacharya application/zip

Select appropriate tab below to view additional metadata details:

Combined analysis:

Analysis ID AN001798
Analysis type MS
Chromatography type Reversed phase
Chromatography system Thermo Accela 600
Column Thermo Acclaim C30 (150 x 2.1mm,3um)
MS instrument type Orbitrap
MS instrument name Thermo Q Exactive Orbitrap
Units main area


Chromatography ID:CH001269
Chromatography Summary:As described in attached method file.
Methods Filename:Methods.docx
Instrument Name:Thermo Accela 600
Column Name:Thermo Acclaim C30 (150 x 2.1mm,3um)
Chromatography Type:Reversed phase