Summary of Study ST002790
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001021. The data can be accessed directly via it's Project DOI: 10.21228/M8QM5H This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST002790 |
| Study Title | Community metabolomes reflect taxon-specific fingerprints of phytoplankton and heterotrophic bacteria in the ocean (expanded) |
| Study Type | Metabolomic survey of 46 phytoplankton and heterotrophic bacteria species |
| Study Summary | This study is an updated version of the prior study in this project, ST001514. With this update we introduce additional marine species, in particular the heterotrophic bacteria, and include our expanded library of authentic standards (available at https://github.com/IngallsLabUW/Ingalls_Standards/blob/430992e10c0464a817c69d22e3905d73f2ea196f/Ingalls_Lab_Standards.csv) for improved targeted coverage. |
| Institute | University of Washington |
| Last Name | Kumler |
| First Name | William |
| Address | 1501 NE Boat St, Seattle, WA, 98105, USA |
| wkumler@uw.edu | |
| Phone | 9095551234 |
| Submit Date | 2023-07-20 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | mzML |
| Analysis Type Detail | LC-MS |
| Release Date | 2023-08-07 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Other organism; Subject species: Marine plankton (Factor headings shown in green)
| mb_sample_id | local_sample_id | Sample_type | Species_strain | Broad_taxon | MS_run |
|---|---|---|---|---|---|
| SA299298 | 211218_Blk_MediaBlk_21_pos.mzML | Blank | NA | NA | NA |
| SA299299 | 211218_Blk_MediaBlk_3430_pos.mzML | Blank | NA | NA | NA |
| SA299300 | 211218_Blk_MediaBlk_49_pos.mzML | Blank | NA | NA | NA |
| SA299301 | 211218_Blk_MediaBlk_71_pos.mzML | Blank | NA | NA | NA |
| SA299302 | 220111_Blk_MediaBlk_A_pos.mzML | Blank | NA | NA | NA |
| SA299303 | 220111_Blk_MediaBlk_AMS_pos.mzML | Blank | NA | NA | NA |
| SA299304 | 211215_Blk_MediaBlk_Z_pos.mzML | Blank | NA | NA | NA |
| SA299305 | 220111_Blk_MediaBlk_B_pos.mzML | Blank | NA | NA | NA |
| SA299306 | 220111_Blk_MediaBlk_AOA_pos.mzML | Blank | NA | NA | NA |
| SA299307 | 211218_Blk_MediaBlk_N_pos.mzML | Blank | NA | NA | NA |
| SA299308 | 211218_Blk_MediaBlk_O_pos.mzML | Blank | NA | NA | NA |
| SA299309 | 211221_Blk_MediaBlk_C_pos.mzML | Blank | NA | NA | NA |
| SA299310 | 211221_Blk_MediaBlk_1314P_pos.mzML | Blank | NA | NA | NA |
| SA299311 | 211221_Blk_MediaBlk_A_pos.mzML | Blank | NA | NA | NA |
| SA299312 | 211221_Blk_MediaBlk_Nat_pos.mzML | Blank | NA | NA | NA |
| SA299313 | 220104_Blk_MediaBlk_C_pos.mzML | Blank | NA | NA | NA |
| SA299314 | 220104_Blk_MediaBlk_RAC5_pos.mzML | Blank | NA | NA | NA |
| SA299315 | 220104_Blk_MediaBlk_LInoSi_pos.mzML | Blank | NA | NA | NA |
| SA299316 | 220104_Blk_MediaBlk_H_pos.mzML | Blank | NA | NA | NA |
| SA299317 | 211215_Blk_MediaBlk_Pc55x_pos.mzML | Blank | NA | NA | NA |
| SA299318 | 211221_Blk_MediaBlk_As9601_pos.mzML | Blank | NA | NA | NA |
| SA299319 | 211215_Blk_MediaBlk_B_pos.mzML | Blank | NA | NA | NA |
| SA299320 | 211215_Blk_MediaBlk_A_pos.mzML | Blank | NA | NA | NA |
| SA299321 | 211215_Blk_MediaBlk_Fc_pos.mzML | Blank | NA | NA | NA |
| SA299322 | 220111_Poo_TruePooBacteria_Full1.mzML | QC Pooled | NA | NA | Bacteria |
| SA299323 | 220111_Poo_TruePooBacteria_Full2.mzML | QC Pooled | NA | NA | Bacteria |
| SA299324 | 220111_Poo_TruePooBacteria_Half3.mzML | QC Pooled | NA | NA | Bacteria |
| SA299325 | 220111_Poo_TruePooBacteria_Half1.mzML | QC Pooled | NA | NA | Bacteria |
| SA299326 | 220111_Poo_TruePooBacteria_Half2.mzML | QC Pooled | NA | NA | Bacteria |
| SA299327 | 220111_Poo_TruePooBacteria_Full3.mzML | QC Pooled | NA | NA | Bacteria |
| SA299328 | 211102_Poo_TruePooCyanos_Full1.mzML | QC Pooled | NA | NA | Cyanos |
| SA299329 | 211102_Poo_TruePooCyanos_Full2.mzML | QC Pooled | NA | NA | Cyanos |
| SA299330 | 211102_Poo_TruePooCyanos_Half3.mzML | QC Pooled | NA | NA | Cyanos |
| SA299331 | 211102_Poo_TruePooCyanos_Half2.mzML | QC Pooled | NA | NA | Cyanos |
| SA299332 | 211102_Poo_TruePooCyanos_Half1.mzML | QC Pooled | NA | NA | Cyanos |
| SA299333 | 211102_Poo_TruePooCyanos_Full3.mzML | QC Pooled | NA | NA | Cyanos |
| SA299334 | 211102_Poo_TruePooDiatoms_Half3.mzML | QC Pooled | NA | NA | Diatom |
| SA299335 | 211102_Poo_TruePooDiatoms_Half1.mzML | QC Pooled | NA | NA | Diatom |
| SA299336 | 211102_Poo_TruePooDiatoms_Half2.mzML | QC Pooled | NA | NA | Diatom |
| SA299337 | 211102_Poo_TruePooDiatoms_Full2.mzML | QC Pooled | NA | NA | Diatom |
| SA299338 | 211102_Poo_TruePooDiatoms_Full1.mzML | QC Pooled | NA | NA | Diatom |
| SA299339 | 211102_Poo_TruePooDiatoms_Full3.mzML | QC Pooled | NA | NA | Diatom |
| SA299340 | 211102_Poo_TruePooDinosGreens_Full2.mzML | QC Pooled | NA | NA | DinosGreens |
| SA299341 | 211102_Poo_TruePooDinosGreens_Full1.mzML | QC Pooled | NA | NA | DinosGreens |
| SA299342 | 211102_Poo_TruePooDinosGreens_Half1.mzML | QC Pooled | NA | NA | DinosGreens |
| SA299343 | 211102_Poo_TruePooDinosGreens_Full3.mzML | QC Pooled | NA | NA | DinosGreens |
| SA299344 | 211102_Poo_TruePooDinosGreens_Half3.mzML | QC Pooled | NA | NA | DinosGreens |
| SA299345 | 211102_Poo_TruePooDinosGreens_Half2.mzML | QC Pooled | NA | NA | DinosGreens |
| SA299346 | 220104_Poo_TruePooHaptophytes_Half1.mzML | QC Pooled | NA | NA | Haptophytes |
| SA299347 | 220104_Poo_TruePooHaptophytes_Half2.mzML | QC Pooled | NA | NA | Haptophytes |
| SA299348 | 220104_Poo_TruePooHaptophytes_Full3.mzML | QC Pooled | NA | NA | Haptophytes |
| SA299349 | 220104_Poo_TruePooHaptophytes_Full2.mzML | QC Pooled | NA | NA | Haptophytes |
| SA299350 | 220104_Poo_TruePooHaptophytes_Half3.mzML | QC Pooled | NA | NA | Haptophytes |
| SA299351 | 220104_Poo_TruePooHaptophytes_Full1.mzML | QC Pooled | NA | NA | Haptophytes |
| SA299352 | 211218_Smp_1771_A_pos.mzML | Sample | Alexandrium tamarense CCMP1771 | Dinoflagellates | DinosGreens |
| SA299353 | 211218_Smp_1771_C_pos.mzML | Sample | Alexandrium tamarense CCMP1771 | Dinoflagellates | DinosGreens |
| SA299354 | 211218_Smp_1771_B_pos.mzML | Sample | Alexandrium tamarense CCMP1771 | Dinoflagellates | DinosGreens |
| SA299355 | 211221_Smp_1314P_B_pos.mzML | Sample | Amphidinium carterae CCMP1314 | Dinoflagellates | DinosGreens |
| SA299356 | 211221_Smp_1314P_C_pos.mzML | Sample | Amphidinium carterae CCMP1314 | Dinoflagellates | DinosGreens |
| SA299357 | 211221_Smp_1314P_A_pos.mzML | Sample | Amphidinium carterae CCMP1314 | Dinoflagellates | DinosGreens |
| SA299358 | 211218_Smp_1314_C_pos.mzML | Sample | Amphidinium carterae CCMP1314 | Dinoflagellates | DinosGreens |
| SA299359 | 211218_Smp_1314_A_pos.mzML | Sample | Amphidinium carterae CCMP1314 | Dinoflagellates | DinosGreens |
| SA299360 | 211218_Smp_1314_B_pos.mzML | Sample | Amphidinium carterae CCMP1314 | Dinoflagellates | DinosGreens |
| SA299361 | 220104_Smp_Ca_A_pos.mzML | Sample | Chrysochromulina acantha | Haptophytes | Haptos |
| SA299362 | 220104_Smp_Ca_C_pos.mzML | Sample | Chrysochromulina acantha | Haptophytes | Haptos |
| SA299363 | 220104_Smp_Ca_B_pos.mzML | Sample | Chrysochromulina acantha | Haptophytes | Haptos |
| SA299370 | 220104_Smp_P3_A_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299371 | 220104_Smp_116-1_B_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299372 | 220104_Smp_116-1_A_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299373 | 220104_Smp_P5-5_C_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299374 | 220104_Smp_P3_B_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299375 | 220104_Smp_116-1_C_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299376 | 220104_Smp_P3_C_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299377 | 220104_Smp_P5-5_A_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299378 | 220104_Smp_P5-5_B_pos.mzML | Sample | Chrysochromulina | Haptophytes | Haptos |
| SA299364 | 220104_Smp_Cr_A_pos.mzML | Sample | Chrysochromulina rotalis | Haptophytes | Haptos |
| SA299365 | 220104_Smp_Cr_C_pos.mzML | Sample | Chrysochromulina rotalis | Haptophytes | Haptos |
| SA299366 | 220104_Smp_Cr_B_pos.mzML | Sample | Chrysochromulina rotalis | Haptophytes | Haptos |
| SA299367 | 220104_Smp_Cs_C_pos.mzML | Sample | Chrysochromulina simplex | Haptophytes | Haptos |
| SA299368 | 220104_Smp_Cs_A_pos.mzML | Sample | Chrysochromulina simplex | Haptophytes | Haptos |
| SA299369 | 220104_Smp_Cs_B_pos.mzML | Sample | Chrysochromulina simplex | Haptophytes | Haptos |
| SA299379 | 220111_Smp_SA60_A_pos.mzML | Sample | Croceibacter (CFB) SA60 | Heterotrophic Bacteria | Bacteria |
| SA299380 | 220111_Smp_SA60_B_pos.mzML | Sample | Croceibacter (CFB) SA60 | Heterotrophic Bacteria | Bacteria |
| SA299381 | 220111_Smp_SA60_C_pos.mzML | Sample | Croceibacter (CFB) SA60 | Heterotrophic Bacteria | Bacteria |
| SA299382 | 211221_Smp_8501_D_pos.mzML | Sample | Crocosphaera watsonii WH8501 | Cyanos | Cyanos |
| SA299383 | 211221_Smp_8501_C_pos.mzML | Sample | Crocosphaera watsonii WH8501 | Cyanos | Cyanos |
| SA299384 | 211221_Smp_8501_B_pos.mzML | Sample | Crocosphaera watsonii WH8501 | Cyanos | Cyanos |
| SA299385 | 211215_Smp_Cy_B_pos.mzML | Sample | Cyclotella meneghiniana CCMP 338 | Diatoms | Diatom |
| SA299386 | 211215_Smp_Cy_C_pos.mzML | Sample | Cyclotella meneghiniana CCMP 338 | Diatoms | Diatom |
| SA299387 | 211215_Smp_Cy_A_pos.mzML | Sample | Cyclotella meneghiniana CCMP 338 | Diatoms | Diatom |
| SA299388 | 220104_Smp_2090_B_pos.mzML | Sample | Emiliana huxleyi CCMP2090 (baller) | Haptophytes | Haptos |
| SA299389 | 220104_Smp_2090_A_pos.mzML | Sample | Emiliana huxleyi CCMP2090 (baller) | Haptophytes | Haptos |
| SA299390 | 220104_Smp_2090_C_pos.mzML | Sample | Emiliana huxleyi CCMP2090 (baller) | Haptophytes | Haptos |
| SA299391 | 220104_Smp_371_C_pos.mzML | Sample | Emiliana huxleyi CCMP371 (c) | Haptophytes | Haptos |
| SA299392 | 220104_Smp_371_A_pos.mzML | Sample | Emiliana huxleyi CCMP371 (c) | Haptophytes | Haptos |
| SA299393 | 220104_Smp_371_B_pos.mzML | Sample | Emiliana huxleyi CCMP371 (c) | Haptophytes | Haptos |
| SA299394 | 211215_Smp_Fc_B_pos.mzML | Sample | Fragilariopsis cylindrus CCMP3383 | Diatoms | Diatom |
| SA299395 | 211215_Smp_Fc_A_pos.mzML | Sample | Fragilariopsis cylindrus CCMP3383 | Diatoms | Diatom |
| SA299396 | 211215_Smp_Fc_C_pos.mzML | Sample | Fragilariopsis cylindrus CCMP3383 | Diatoms | Diatom |
| SA299397 | 211218_Smp_449_C_pos.mzML | Sample | Heterocapsa triquetra CCMP449 | Dinoflagellates | DinosGreens |
