Summary of Study ST000699

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000496. The data can be accessed directly via it's Project DOI: 10.21228/M8Z32C This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  
Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data files (Contains raw data)
Study IDST000699
Study TitleHuman vitreous amino acid & lipid analysis
Study TypeMS analysis
Study SummaryHuman vitreous was collected in the OR at time of indicated surgery. No treatments were involved. Diagnoses are: epiretinal membranes (ERM); proliferative diabetic retinopathy (PDR); retinal detachment (RD)
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Emailmkachman@med.umich.edu
Phone(734) 232-8175
Submit Date2017-06-19
Num Groups3
Total Subjects3
Raw Data AvailableYes
Raw Data File Type(s)d
Analysis Type DetailGC/LC-MS
Release Date2017-12-06
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8Z32C
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Combined analysis:

Analysis ID AN001085 AN001086 AN001087
Analysis type MS MS MS
Chromatography type Reversed phase Reversed phase GC
Chromatography system Shimadzu CTO-20A Nexera X2 Shimadzu CTO-20A Nexera X2 Agilent 7890N
Column Waters Acquity HSS T3 (50 x 2.1mm, 1.8um) Waters Acquity HSS T3 (50 x 2.1mm, 1.8um) Phenomenex Zebron ZB-AAA Amino Acid Analysis 10m x 0.25mm
MS Type ESI ESI EI
MS instrument type Triple TOF Triple TOF Single quadrupole
MS instrument name ABI Sciex 5600+ TripleTOF ABI Sciex 5600+ TripleTOF Agilent 5975
Ion Mode NEGATIVE POSITIVE POSITIVE
Units peak area normalized peak area normalized uM

MS:

MS ID:MS000980
Analysis ID:AN001085
Instrument Name:ABI Sciex 5600+ TripleTOF
Instrument Type:Triple TOF
MS Type:ESI
Ion Mode:NEGATIVE
Analysis Protocol File:A004_-_Shotgun_Lipidomics.pdf
  
MS ID:MS000981
Analysis ID:AN001086
Instrument Name:ABI Sciex 5600+ TripleTOF
Instrument Type:Triple TOF
MS Type:ESI
Ion Mode:POSITIVE
Analysis Protocol File:A004_-_Shotgun_Lipidomics.pdf
  
MS ID:MS000982
Analysis ID:AN001087
Instrument Name:Agilent 5975
Instrument Type:Single quadrupole
MS Type:EI
Ion Mode:POSITIVE
Analysis Protocol File:A005 - Amino Acids.pdf
  logo